RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CACUL1Q86Y37 369 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 UBLCP1Q8WVY7 318 aaPredicted RBP20.76■□□□□ 0.91
CHD3-204ENST00000439235 ZNF669Q96BR6 464 aaPredicted RBP20.76■□□□□ 0.91
CHD3-204ENST00000439235 SIPA1Q96FS4 1042 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 GPR63Q9BZJ6 419 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 MKRN2Q9H000 416 aaKnown RBP20.76■□□□□ 0.91
CHD3-204ENST00000439235 SEMA4AQ9H3S1 761 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 VPS37BQ9H9H4 285 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 PCDH12Q9NPG4 1184 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 CHRAC1Q9NRG0 131 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 B4GALT6Q9UBX8 382 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 SIT1Q9Y3P8 196 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 RPS6KL1Q9Y6S9 549 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 ANKRD36A6QL64 1941 aa20.76■□□□□ 0.91
CHD3-204ENST00000439235 C1orf232A0A0U1RR37 186 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 MROH6A6NGR9 719 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 NPIPB15A6NHN6 443 aaPredicted RBP20.75■□□□□ 0.91
CHD3-204ENST00000439235 ZNF30P17039 623 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 PAMP19021 973 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 P2RY2P41231 377 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 FAM193AP78312 1265 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 ARHGEF7Q14155 803 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 KYNUQ16719 465 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 STEAP4Q687X5 459 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 UNC5AQ6ZN44 842 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 DPPA4Q7L190 304 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 LYSMD3Q7Z3D4 306 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 SPEM1Q8N4L4 309 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 TTC30BQ8N4P2 665 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 FLCNQ8NFG4 579 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 MDGA1Q8NFP4 955 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 GSDMBQ8TAX9 411 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 ANKRD7Q92527 254 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 SMIM14Q96QK8 99 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 OMDQ99983 421 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 F5P12259 2224 aa20.75■□□□□ 0.91
CHD3-204ENST00000439235 MUC3AQ02505 3323 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 RIPK2O43353 540 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 LDB2O43679 373 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ALDH1A2O94788 518 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ACSL3O95573 720 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 SLC4A1P02730 911 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ABHD2P08910 425 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ACADMP11310 421 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 NDUFV2P19404 249 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 LPOP22079 712 aaPredicted RBP20.74■□□□□ 0.91
CHD3-204ENST00000439235 DRD3P35462 400 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 MMP12P39900 470 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 CNTN1Q12860 1018 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 GAS6Q14393 721 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 CRYMQ14894 314 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 SKIDA1Q1XH10 827 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ANKRD20A4Q4UJ75 823 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 LRRC73Q5JTD7 316 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 CRTC1Q6UUV9 634 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 KIAA1324Q6UXG2 1013 aaKnown RBP20.74■□□□□ 0.91
CHD3-204ENST00000439235 KBTBD6Q86V97 674 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 HDDC3Q8N4P3 179 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 AADATQ8N5Z0 425 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHD3-204ENST00000439235 TSTD1Q8NFU3 115 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 GANCQ8TET4 914 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 STYXQ8WUJ0 223 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 PBXIP1Q96AQ6 731 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 MRGPRX1Q96LB2 322 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 C19orf43Q9BQ61 176 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ZFYVE1Q9HBF4 777 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 LRRC4CQ9HCJ2 640 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 ARL5AQ9Y689 179 aa20.74■□□□□ 0.91
CHD3-204ENST00000439235 A0A1W2PP55 124 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 STX7O15400 261 aaKnown RBP20.73■□□□□ 0.91
CHD3-204ENST00000439235 SLC7A4O43246 635 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 RNASEH2AO75792 299 aaKnown RBP20.73■□□□□ 0.91
CHD3-204ENST00000439235 GABRG2P18507 467 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 NMBRP28336 390 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 STX2P32856 288 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 HSD17B3P37058 310 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 ZNF140P52738 457 aaPredicted RBP20.73■□□□□ 0.91
CHD3-204ENST00000439235 PIP5KL1Q5T9C9 394 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 LRRC66Q68CR7 880 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 CAPN12Q6ZSI9 719 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 C3orf62Q6ZUJ4 267 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 USP30Q70CQ3 517 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 MFSD3Q96ES6 412 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 TREX1Q9NSU2 369 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 POLR3BQ9NW08 1133 aaPredicted RBP20.73■□□□□ 0.91
CHD3-204ENST00000439235 NCKAP1Q9Y2A7 1128 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 PKP3Q9Y446 797 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 FAM169AQ9Y6X4 670 aa20.73■□□□□ 0.91
CHD3-204ENST00000439235 A0A087WUV0 522 aaPredicted RBP20.72■□□□□ 0.91
CHD3-204ENST00000439235 CCDC78A2IDD5 438 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 H0Y858 1186 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 PLK4O00444 970 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 NEMP1O14524 444 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 AURKAO14965 403 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 AREL1O15033 823 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 AP1G1O43747 822 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 CLDN7O95471 211 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 LHCGRP22888 699 aa20.72■□□□□ 0.91
CHD3-204ENST00000439235 SSTR1P30872 391 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms