RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PBX1P40424 430 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 MMP13P45452 471 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 ERVPABLB-1P60509 514 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 CCDC122Q5T0U0 273 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 MARC1Q5VT66 337 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 DENND2CQ68D51 928 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 SPACA3Q8IXA5 215 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 FUBP1Q96AE4 644 aaKnown RBP18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 UBL7Q96S82 380 aaPredicted RBP18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 B4GALT6Q9UBX8 382 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 DGKBQ9Y6T7 804 aa18.51■□□□□ 0.55
AC004540.1-201ENST00000439120 SHROOM3Q8TF72 1996 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 A0A087X0T9 212 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 TMEM202A6NGA9 273 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 PDE2AO00408 941 aaPredicted RBP18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 MAFKO60675 156 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 CYP1A2P05177 515 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 TPM3P06753 285 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 FAM228BP0C875 321 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 CYP2A6P11509 494 aaPredicted RBP18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 VIPR1P32241 457 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 GJC1P36383 396 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 SLC25A11Q02978 314 aaKnown RBP18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 RALGPS1Q5JS13 557 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 TXNRD3NBQ6F5E7 133 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 ALKBH5Q6P6C2 394 aaKnown RBP18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 TAF8Q7Z7C8 310 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 OR6C4Q8NGE1 309 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 CCDC74AQ96AQ1 378 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 NUS1Q96E22 293 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 RBM15Q96T37 977 aaKnown RBP eCLIP18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 MGME1Q9BQP7 344 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 PRORYQ9H606 182 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 KCTD5Q9NXV2 234 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 IFNKQ9P0W0 207 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 RCOR3Q9P2K3 495 aaPredicted RBP18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 ENTPD2Q9Y5L3 495 aa18.5■□□□□ 0.55
AC004540.1-201ENST00000439120 LOC400499M0QZD8 3231 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 HTRA2O43464 458 aaPredicted RBP18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 KRT10P13645 584 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 MAXP61244 160 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 CXADRP78310 365 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 TLE3Q04726 772 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 ITKQ08881 620 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 ARHGEF7Q14155 803 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 PNCKQ6P2M8 343 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 LRRC49Q8IUZ0 686 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 NDUFAF2Q8N183 169 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 PGBD5Q8N414 524 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 ARL14Q8N4G2 192 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 FAM46DQ8NEK8 389 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 WDR36Q8NI36 951 aaKnown RBP18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 KCNE4Q8WWG9 221 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 OR1E3Q8WZA6 343 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 GFM1Q96RP9 751 aaKnown RBP18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 CYP4F12Q9HCS2 524 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 FGF22Q9HCT0 170 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 MRPL40Q9NQ50 206 aaKnown RBP18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 HAUS2Q9NVX0 235 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 PHTF1Q9UMS5 762 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 RAI2Q9Y5P3 530 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 ASXL3Q9C0F0 2248 aa18.49■□□□□ 0.55
AC004540.1-201ENST00000439120 GOLGA6CA6NDK9 693 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 GOLGA6BA6NDN3 693 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 TNFRSF10CO14798 259 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 PEX11BO96011 259 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 HOXC4P09017 264 aaPredicted RBP18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 GOLGA6DP0CG33 693 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 CR2P20023 1033 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 PTMSP20962 102 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 CNGA3Q16281 694 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 TSR1Q2NL82 804 aaKnown RBP18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 ARMC12Q5T9G4 340 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 NYAP1Q6ZVC0 841 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 USP45Q70EL2 814 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 ZNF564Q8TBZ8 553 aaPredicted RBP18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 SPOCK2Q92563 424 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 HIC2Q96JB3 615 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 COQ10AQ96MF6 247 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 NSMCE3Q96MG7 304 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 NT5MQ9NPB1 228 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 ASCL3Q9NQ33 180 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 PHPT1Q9NRX4 125 aaPredicted RBP18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 GOLGA6AQ9NYA3 693 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 CTTNBP2NLQ9P2B4 639 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 RP1P56715 2156 aa18.48■□□□□ 0.55
AC004540.1-201ENST00000439120 CCDC187A0A096LP49 1063 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 B4DGG1 531 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 HEXIM1O94992 359 aaKnown RBP18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 GYPCP04921 128 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 MYCLP1P12525 358 aaPredicted RBP18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 CASP14P31944 242 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 TRIM23P36406 574 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 UCNP55089 124 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 TMPRSS3P57727 454 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 TRAF2Q12933 501 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 MMRN1Q13201 1228 aa18.47■□□□□ 0.55
AC004540.1-201ENST00000439120 ZFYVE27Q5T4F4 411 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms