RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 NOX1Q9Y5S8 564 aa13.43□□□□□ -0.26
ACTN1-204ENST00000438964 A0A1B0GTL3 188 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 A8MT66 165 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 MAFGO15525 162 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 BEST1O76090 585 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 INMTO95050 263 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 LINC00032P0C843 101 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 IDO1P14902 403 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ITGB6P18564 788 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 CAPGP40121 348 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SEPHS1P49903 392 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 CRTC3Q6UUV7 619 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ADGRG5Q8IZF4 528 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 LPAR1Q92633 364 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 NSUN5Q96P11 429 aaKnown RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 AKTIPQ9H8T0 292 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ZNF229Q9UJW7 825 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 TRAF6Q9Y4K3 522 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ANGPT2O15123 496 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SNAP91O60641 907 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 PGK2P07205 417 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 AXLP30530 894 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 DIO3P55073 304 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 LGI2Q8N0V4 545 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 CLEC4FQ8N1N0 589 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 OR52K2Q8NGK3 314 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 OR10Q1Q8NGQ4 319 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 RDH11Q8TC12 318 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 KCNN1Q92952 543 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 FEM1CQ96JP0 617 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 TEX37Q96LM6 180 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 HBEGFQ99075 208 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 OLFM1Q99784 485 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SLC25A23Q9BV35 468 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 FUNDC2Q9BWH2 189 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 TPK1Q9H3S4 243 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 RHOJQ9H4E5 214 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SMURF2Q9HAU4 748 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 GOLGA2P5Q9HBQ8 144 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SETD4Q9NVD3 440 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 UTP6Q9NYH9 597 aaKnown RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 GNPTGQ9UJJ9 305 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 FZD10Q9ULW2 581 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 INVSQ9Y283 1065 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 RAD54BQ9Y620 910 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 FER1L6Q2WGJ9 1857 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 TTC24A2A3L6 582 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ZBTB42B2RXF5 422 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 AP3B1O00203 1094 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 DPYSL4O14531 572 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 BCAS1O75363 584 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 STX1BP61266 288 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 MBTD1Q05BQ5 628 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SLCO6A1Q86UG4 719 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 STK32CQ86UX6 486 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 OR13F1Q8NGS4 319 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 SLC7A14Q8TBB6 771 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 CENPNQ96H22 339 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-204ENST00000438964 CDHR1Q96JP9 859 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
ACTN1-204ENST00000438964 H2AFYO75367 372 aaKnown RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 ALBP02768 609 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 IGFBP6P24592 240 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 HTR1BP28222 390 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 INPP5AQ14642 412 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 RPS6KA2Q15349 733 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 ATP6AP1Q15904 470 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 TIGD2Q4W5G0 525 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 XAF1Q6GPH4 301 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 C4orf22Q6V702 233 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 NDNFQ8TB73 568 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 TRUB1Q8WWH5 349 aaKnown RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 ISL2Q96A47 359 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 SH3YL1Q96HL8 342 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 MAELQ96JY0 434 aaKnown RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 C9orf16Q9BUW7 83 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 C1orf50Q9BV19 199 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 UTS2RQ9UKP6 389 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 AKT3Q9Y243 479 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 LY75O60449 1722 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 H0Y858 1186 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 CAPN15O75808 1086 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 ARF4P18085 180 aaPredicted RBP13.41□□□□□ -0.26
ACTN1-204ENST00000438964 PRKACGP22612 351 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 NAB1Q13506 487 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 AAK1Q2M2I8 961 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 IER5Q5VY09 327 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 CCDC80Q76M96 950 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 PCYOX1LQ8NBM8 494 aa13.41□□□□□ -0.26
ACTN1-204ENST00000438964 EDEM1Q92611 657 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms