RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 WSCD2Q2TBF2 565 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 CES4AQ5XG92 561 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 NRROSQ86YC3 692 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 SIMC1Q8NDZ2 872 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 CXorf40AQ8TE69 158 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 PPP4R1Q8TF05 950 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 CCDC127Q96BQ5 260 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 MBD6Q96DN6 1003 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 RMND5BQ96G75 393 aaPredicted RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 NT5C1BQ96P26 610 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 SLC38A3Q99624 504 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 FEM1AQ9BSK4 669 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 WRAP53Q9BUR4 548 aaKnown RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 ZSCAN16Q9H4T2 348 aaPredicted RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 SUDS3Q9H7L9 328 aaPredicted RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 MRPL44Q9H9J2 332 aaKnown RBP11.12□□□□□ -0.63
RTN4-211ENST00000438462 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 ZNF358Q9NW07 568 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 VPS51Q9UID3 782 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 MOSPD1Q9UJG1 213 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 SNX7Q9UNH6 387 aa11.12□□□□□ -0.63
RTN4-211ENST00000438462 ANK3Q12955 4377 aaKnown RBP11.11□□□□□ -0.63
RTN4-211ENST00000438462 TCAF2A6NFQ2 919 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 FOXO6A8MYZ6 492 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 SNAP91O60641 907 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 UNC5CO95185 931 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 GCNT3O95395 438 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 AK4P27144 223 aaPredicted RBP11.11□□□□□ -0.63
RTN4-211ENST00000438462 SCNN1AP37088 669 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 CASP5P51878 434 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 MCM6Q14566 821 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 ZNF169Q14929 603 aaPredicted RBP11.11□□□□□ -0.63
RTN4-211ENST00000438462 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
RTN4-211ENST00000438462 SLC30A9Q6PML9 568 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 NCCRP1Q6ZVX7 275 aaPredicted RBP11.11□□□□□ -0.63
RTN4-211ENST00000438462 KRTAP1-3Q8IUG1 177 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 CIARTQ8N365 385 aaPredicted RBP11.11□□□□□ -0.63
RTN4-211ENST00000438462 ZBTB2Q8N680 514 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 TBC1D7Q9P0N9 293 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 ZNHIT2Q9UHR6 403 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 OR51B4Q9Y5P0 310 aa11.11□□□□□ -0.63
RTN4-211ENST00000438462 C16orf96A6NNT2 1141 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 SLCO2B1O94956 709 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 ANKRD34CP0C6C1 535 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 FGF5P12034 268 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 MAPK9P45984 424 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 NUCB2P80303 420 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 ADIGQ0VDE8 80 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 KCNAB1Q14722 419 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.1□□□□□ -0.63
RTN4-211ENST00000438462 B3GNTL1Q67FW5 361 aaPredicted RBP11.1□□□□□ -0.63
RTN4-211ENST00000438462 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 RUFY3Q7L099 469 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 PPP1R3BQ86XI6 285 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 GALNT16Q8N428 558 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 NR4A3Q92570 626 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 ARHGEF26Q96DR7 871 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 TRIM56Q9BRZ2 755 aaKnown RBP11.1□□□□□ -0.63
RTN4-211ENST00000438462 GSDMCQ9BYG8 508 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 NDFIP2Q9NV92 336 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 TRPS1Q9UHF7 1281 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 TINAGQ9UJW2 476 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 SVEP1Q4LDE5 3571 aa11.1□□□□□ -0.63
RTN4-211ENST00000438462 HCFC1P51610 2035 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 F5H5T6 163 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 AREL1O15033 823 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
RTN4-211ENST00000438462 GABBR2O75899 941 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 REC8O95072 547 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 P4HA1P13674 534 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 PSMA5P28066 241 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 ASPAP45381 313 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 CCNHP51946 323 aaPredicted RBP11.09□□□□□ -0.63
RTN4-211ENST00000438462 CASP6P55212 293 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 KIAA1024LP59773 190 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 ILF3Q12906 894 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTN4-211ENST00000438462 MYBPHQ13203 477 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 BIRC3Q13489 604 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.631e-6■□□□□ 10.6
RTN4-211ENST00000438462 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 TECPR1Q7Z6L1 1165 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 ENDOVQ8N8Q3 282 aaKnown RBP11.09□□□□□ -0.63
RTN4-211ENST00000438462 DNAJB14Q8TBM8 379 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 ADAMTS18Q8TE60 1221 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 FUBP1Q96AE4 644 aaKnown RBP11.09□□□□□ -0.63
RTN4-211ENST00000438462 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
RTN4-211ENST00000438462 PPP1R9BQ96SB3 815 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 PSMB7Q99436 277 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 HEPHQ9BQS7 1158 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 NT5C1AQ9BXI3 368 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 POLDIP3Q9BY77 421 aaKnown RBP11.09□□□□□ -0.63
RTN4-211ENST00000438462 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
RTN4-211ENST00000438462 ZANQ9Y493 2812 aa11.08□□□□□ -0.64
RTN4-211ENST00000438462 PRSS38A1L453 326 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms