RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AADATQ8N5Z0 425 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CASP10Q92851 521 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 BHMTQ93088 406 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ASB9Q96DX5 294 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PCED1BQ96HM7 432 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 DNAJC1Q96KC8 554 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PLEKHG4BQ96PX9 1271 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 GPR22Q99680 433 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 KLHL25Q9H0H3 589 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 HMG20AQ9NP66 347 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 NMRK2Q9NPI5 230 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ZDHHC2Q9UIJ5 367 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 VPS28Q9UK41 221 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 INVSQ9Y283 1065 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 TPRKBQ9Y3C4 175 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MFHAS1Q9Y4C4 1052 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 FAM149AA5PLN7 773 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RGS14O43566 566 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 DLX3O60479 287 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SLC22A3O75751 556 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SLC7A1P30825 629 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SLC1A2P43004 574 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 OLIG2Q13516 323 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PAFAH1B3Q15102 231 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 LDB1Q86U70 411 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 OR4L1Q8NH43 312 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 GIPC3Q8TF64 312 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 TWIST2Q8WVJ9 160 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 IRGQQ8WZA9 623 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ROPN1LQ96C74 230 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RTP4Q96DX8 246 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ADAM2Q99965 735 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MLPHQ9BV36 600 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SLC25A51Q9H1U9 297 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 C3orf18Q9UK00 162 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PCDHB8Q9UN66 801 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ST3GAL5Q9UNP4 418 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 AP3M1Q9Y2T2 418 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CCDC189A1A4V9 331 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RNASEH1O60930 286 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CBFA2T3O75081 653 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RECQL5O94762 991 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 KCNH1O95259 989 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CYBBP04839 570 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 LAMB1P07942 1786 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PCNAP12004 261 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 HTR7P34969 479 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 BRCC3P46736 316 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 LRRC74AQ0VAA2 488 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 MAPKAPK3Q16644 382 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RGS21Q2M5E4 152 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SYTL3Q4VX76 610 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RAB6CQ53S08 254 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 TSTD2Q5T7W7 516 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 IL23RQ5VWK5 629 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ARMC3Q5W041 872 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 FAM91A1Q658Y4 838 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 TXNDC11Q6PKC3 985 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PAOXQ6QHF9 649 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 AFTPHQ6ULP2 937 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SPESP1Q6UW49 350 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 GPR142Q7Z601 462 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ZBTB46Q86UZ6 589 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 STK40Q8N2I9 435 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CPSF7Q8N684 471 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 ARFGAP1Q8N6T3 406 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 SEPT8Q92599 483 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 CENPNQ96H22 339 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 FOPNLQ96NB1 174 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 FCRL5Q96RD9 977 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 PKP2Q99959 881 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 RAB6CQ9H0N0 254 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
CSDE1-205ENST00000438362 KCNK13Q9HB14 408 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 HPS4Q9NQG7 708 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 TMPRSS4Q9NRS4 437 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 GIT1Q9Y2X7 761 aa6.7□□□□□ -1.34
CSDE1-205ENST00000438362 COL22A1Q8NFW1 1626 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SF3B1O75533 1304 aaKnown RBP eCLIP6.69□□□□□ -1.341e-12■■■■■ 42.1
CSDE1-205ENST00000438362 PRRG1O14668 218 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 PARNO95453 639 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 DLGAP3O95886 979 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 AHSGP02765 367 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CKMT2P17540 419 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 S100A3P33764 101 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TTPAP49638 278 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ZNF157P51786 506 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 HUNKP57058 714 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 MRPS6P82932 125 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 RUNX1T1Q06455 604 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 ARHGAP1Q07960 439 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SLC10A2Q12908 348 aaPredicted RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TRAP1Q12931 704 aaKnown RBP6.69□□□□□ -1.34
CSDE1-205ENST00000438362 C9orf131Q5VYM1 1079 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 CLEC20AQ6ZU45 233 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 HS6ST3Q8IZP7 471 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 SVOPQ8N4V2 548 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 FBXO27Q8NI29 283 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 BORCS5Q969J3 196 aa6.69□□□□□ -1.34
CSDE1-205ENST00000438362 TBATAQ96M53 351 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms