RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MAGEC3Q8TD91 643 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 PDCD6IPQ8WUM4 868 aaKnown RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CDKN2AIPNLQ96HQ2 116 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 UBXN10Q96LJ8 280 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 CCDC106Q9BWC9 280 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 SUDS3Q9H7L9 328 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 ARMCX1Q9P291 453 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 RPL26L1Q9UNX3 145 aaKnown RBP25.77■■□□□ 1.72
CPNE1-216ENST00000437340 RAP2CQ9Y3L5 183 aa25.77■■□□□ 1.72
CPNE1-216ENST00000437340 WISP3O95389 354 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-216ENST00000437340 RBP1P09455 135 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 IDH3AP50213 366 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 DNAJB13P59910 316 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 CYP4F8P98187 520 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 TYSND1Q2T9J0 566 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 MPP7Q5T2T1 576 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 NCEH1Q6PIU2 408 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 GLT6D1Q7Z4J2 308 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 ZNF781Q8N8C0 355 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 ALG14Q96F25 216 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 LHX3Q9UBR4 397 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 SPO11Q9Y5K1 396 aa25.76■■□□□ 1.71
CPNE1-216ENST00000437340 C2orf81A6NN90 581 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 CKMP06732 381 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 C8AP07357 584 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 PIRTP0C851 137 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 ATP5F1P24539 256 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-216ENST00000437340 SERPINB5P36952 375 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 CSHL1Q14406 222 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 ACAP2Q15057 778 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 TMC7Q7Z402 723 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 TDRD5Q8NAT2 981 aaKnown RBP25.75■■□□□ 1.71
CPNE1-216ENST00000437340 STON2Q8WXE9 905 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 CCDC126Q96EE4 140 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 GCNAQ96QF7 691 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 INTS10Q9NVR2 710 aaKnown RBP25.75■■□□□ 1.71
CPNE1-216ENST00000437340 IRAK3Q9Y616 596 aa25.75■■□□□ 1.71
CPNE1-216ENST00000437340 MYOGP15173 224 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 CTNNB1P35222 781 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 ALDH18A1P54886 795 aaKnown RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 PRKAA1Q13131 559 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 TECRLQ5HYJ1 363 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 FAM109BQ6ICB4 259 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 AFTPHQ6ULP2 937 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 LINGO4Q6UY18 593 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 LDB1Q86U70 411 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 LONP2Q86WA8 852 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 SUGP1Q8IWZ8 645 aaKnown RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 MAB21L3Q8N8X9 362 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 KREMEN2Q8NCW0 462 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 POPDC3Q9HBV1 291 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 VPS51Q9UID3 782 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 SH3BP1Q9Y3L3 701 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 CEP290O15078 2479 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 TRAV19A0A0A6YYK7 116 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 LINC01553A4QN01 128 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 GRXCR1A8MXD5 290 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 ANKRD66B4E2M5 251 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 BUD23O43709 281 aaKnown RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 NPHS1O60500 1241 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 ARHGEF15O94989 841 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 AOC1P19801 751 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 FDXRP22570 491 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 CSKP41240 450 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 STC1P52823 247 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 NAGLUP54802 743 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 PTPRCAPQ14761 206 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 CFAP157Q5JU67 520 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 EPGNQ6UW88 154 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 SPRED2Q7Z698 418 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 TREML1Q86YW5 311 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 RNF135Q8IUD6 432 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 MFN1Q8IWA4 741 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 HS6ST3Q8IZP7 471 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 SPATA6LQ8N4H0 392 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 LPCAT1Q8NF37 534 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 MDGA1Q8NFP4 955 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 C2orf49Q9BVC5 232 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 EMILIN2Q9BXX0 1053 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 HACD3Q9P035 362 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 BAIAP2L1Q9UHR4 511 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 TAGLN3Q9UI15 199 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-216ENST00000437340 PCDHGC4Q9Y5F7 938 aa25.74■■□□□ 1.71
CPNE1-216ENST00000437340 SLCO1B7G3V0H7 640 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 PDHA1P08559 390 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 CCDC166P0CW27 439 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 BMPR1AP36894 532 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 SUOXP51687 545 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 CDKN2DP55273 166 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 RHOAP61586 193 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 PFKPQ01813 784 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 SHHQ15465 462 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 MPPE1Q53F39 396 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 PIWIL4Q7Z3Z4 852 aaKnown RBP25.73■■□□□ 1.71
CPNE1-216ENST00000437340 USP13Q92995 863 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-216ENST00000437340 TCF12Q99081 682 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 COG4Q9H9E3 785 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 CFAP97Q9P2B7 532 aa25.73■■□□□ 1.71
CPNE1-216ENST00000437340 LZTS1Q9Y250 596 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms