RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 ZDHHC5Q9C0B5 715 aa15.57■□□□□ 0.08
TREX1-201ENST00000433541 RPL26L1Q9UNX3 145 aaKnown RBP15.57■□□□□ 0.08
TREX1-201ENST00000433541 KNL1Q8NG31 2342 aa15.57■□□□□ 0.08
TREX1-201ENST00000433541 PCDH15Q96QU1 1955 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 GOLGA6L10A0A0M3HER8 536 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 C1orf232A0A0U1RR37 186 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 CTAGE9A4FU28 777 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 CAPN8A6NHC0 703 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 H0Y8X5 98 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 PGRMC1O00264 195 aaKnown RBP15.56■□□□□ 0.08
TREX1-201ENST00000433541 VILLO15195 856 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 FZD6O60353 706 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 THEGLP0DJG4 465 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 TGM1P22735 817 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 HNF1BP35680 557 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 THOP1P52888 689 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 WNT3AP56704 352 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 ARHGAP8P85298 464 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 RALGDSQ12967 914 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 MPP3Q13368 585 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 PTPRRQ15256 657 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 CNGA3Q16281 694 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 TSPAN33Q86UF1 283 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 SLC25A41Q8N5S1 370 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 MFSD2AQ8NA29 543 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 DENND6BQ8NEG7 585 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 OR2I1PQ8NGU4 316 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 C1orf216Q8TAB5 229 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 SLC35B2Q8TB61 432 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 CCHCR1Q8TD31 782 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 NUS1Q96E22 293 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 MS4A14Q96JA4 679 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 SMIM14Q96QK8 99 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 ORAI3Q9BRQ5 295 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 GAREM1Q9H706 876 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 GDF3Q9NR23 364 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 HOMER3Q9NSC5 361 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 RXFP3Q9NSD7 469 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 SNX12Q9UMY4 172 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 ZKSCAN5Q9Y2L8 839 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 AAR2Q9Y312 384 aaKnown RBP15.56■□□□□ 0.08
TREX1-201ENST00000433541 SNX11Q9Y5W9 270 aa15.56■□□□□ 0.08
TREX1-201ENST00000433541 A0A0U1RQS6 177 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 ANKRD66B4E2M5 251 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 E7EVH7 732 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 TLR4O00206 839 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 RAD51BO15315 384 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 RECQL5O94762 991 aaPredicted RBP15.55■□□□□ 0.08
TREX1-201ENST00000433541 HEXIM1O94992 359 aaKnown RBP15.55■□□□□ 0.08
TREX1-201ENST00000433541 NDST3O95803 873 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 WNT1P04628 370 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 PIRTP0C851 137 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 TCP1P17987 556 aaKnown RBP15.55■□□□□ 0.08
TREX1-201ENST00000433541 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
TREX1-201ENST00000433541 STIP1P31948 543 aaKnown RBP15.55■□□□□ 0.08
TREX1-201ENST00000433541 LMAN1P49257 510 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 GDF10P55107 478 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 IHHQ14623 411 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 IRF4Q15306 451 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 SLC14A2Q15849 920 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 CCNG2Q16589 344 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 QPCTQ16769 361 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 KIF19Q2TAC6 998 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 P3H1Q32P28 736 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 LRRC66Q68CR7 880 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 GCNT7Q6ZNI0 430 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 Q6ZSR6 202 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 OR13H1Q8NG92 308 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 ASB12Q8WXK4 309 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 SPOCK2Q92563 424 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 OXNAD1Q96HP4 312 aaPredicted RBP15.55■□□□□ 0.08
TREX1-201ENST00000433541 CAPZA3Q96KX2 299 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 WDR24Q96S15 920 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 FICDQ9BVA6 458 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 AP1M1Q9BXS5 423 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 GPR63Q9BZJ6 419 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 USP29Q9HBJ7 922 aa15.55■□□□□ 0.08
TREX1-201ENST00000433541 POM121BA6NF01 834 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 C5orf60A6NFR6 353 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 C4orf47A7E2U8 309 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 PRLP01236 227 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 ZNF30P17039 623 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 KCNA4P22459 653 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 LHCGRP22888 699 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 IGFALSP35858 605 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 RABIFP47224 123 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 OVGP1Q12889 678 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 HLA-BQ31612 363 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 FAXCQ5TGI0 409 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 STPG1Q5TH74 334 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 CRTC1Q6UUV9 634 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 IQCHQ86VS3 1027 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 TMEM145Q8NBT3 493 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 FAM174AQ8TBP5 190 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 NETO1Q8TDF5 533 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 COG1Q8WTW3 980 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 LENG8Q96PV6 779 aaPredicted RBP15.54■□□□□ 0.08
TREX1-201ENST00000433541 MCCC1Q96RQ3 725 aaPredicted RBP15.54■□□□□ 0.08
TREX1-201ENST00000433541 CD84Q9UIB8 345 aa15.54■□□□□ 0.08
TREX1-201ENST00000433541 SHOC2Q9UQ13 582 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms