RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TTC8Q8TAM2 541 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 TSPAN17Q96FV3 270 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 CDKN2AIPNLQ96HQ2 116 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 SIKE1Q9BRV8 207 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 MCOLN1Q9GZU1 580 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 KLC4Q9NSK0 619 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 MTF2Q9Y483 593 aaPredicted RBP19.61■□□□□ 0.73
VRK2-205ENST00000432057 IRAK3Q9Y616 596 aa19.61■□□□□ 0.73
VRK2-205ENST00000432057 ZNF106Q9H2Y7 1883 aaKnown RBP19.61■□□□□ 0.73
VRK2-205ENST00000432057 EN2P19622 333 aaPredicted RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 SLC8A1P32418 973 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 CLCN4P51793 760 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 PTPRRQ15256 657 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 MRNIPQ6NTE8 343 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 PSRC1Q6PGN9 363 aaPredicted RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 UBE2Q1Q7Z7E8 422 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 EFHBQ8N7U6 833 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 ZNF781Q8N8C0 355 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 SHKBP1Q8TBC3 707 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 POF1BQ8WVV4 589 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 TCEAL4Q96EI5 215 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 RILPQ96NA2 401 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 MRPL46Q9H2W6 279 aaKnown RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 GPAMQ9HCL2 828 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 LZTS1Q9Y250 596 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 SLC4A7Q9Y6M7 1214 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 DLX3O60479 287 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 RFPL2O75678 378 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 OGNP20774 298 aaKnown RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 ABL2P42684 1182 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 CCR10P46092 362 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 GRIA4P48058 902 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 LMAN2Q12907 356 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 MPPE1Q53F39 396 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 ZNF549Q6P9A3 640 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 PIM3Q86V86 326 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.6■□□□□ 0.73
VRK2-205ENST00000432057 MRPL43Q8N983 215 aaKnown RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 SH3RF2Q8TEC5 729 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 INPP5DQ92835 1189 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 SGF29Q96ES7 293 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 PTCD3Q96EY7 689 aaKnown RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 ADGRE3Q9BY15 652 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 TM6SF2Q9BZW4 377 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 POLR3BQ9NW08 1133 aaPredicted RBP19.6■□□□□ 0.73
VRK2-205ENST00000432057 CCL26Q9Y258 94 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 VWA7Q9Y334 891 aa19.6■□□□□ 0.73
VRK2-205ENST00000432057 MYO7AQ13402 2215 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 ANKRD66B4E2M5 251 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 SMAD6O43541 496 aaKnown RBP19.59■□□□□ 0.73
VRK2-205ENST00000432057 CCDC166P0CW27 439 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 ALOX15P16050 662 aaPredicted RBP19.59■□□□□ 0.73
VRK2-205ENST00000432057 KPNA2P52292 529 aaKnown RBP19.59■□□□□ 0.73
VRK2-205ENST00000432057 STC1P52823 247 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 USP4Q13107 963 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 TUBB3Q13509 450 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 TECRLQ5HYJ1 363 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 GPR158Q5T848 1215 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 FAM91A1Q658Y4 838 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 FAM45BPQ6NSW5 357 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 FAM45AQ8TCE6 357 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 SPPL3Q8TCT6 385 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 ANKRD49Q8WVL7 239 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 MRPL57Q9BQC6 102 aaKnown RBP19.59■□□□□ 0.73
VRK2-205ENST00000432057 C17orf80Q9BSJ5 609 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 C2orf49Q9BVC5 232 aaPredicted RBP19.59■□□□□ 0.73
VRK2-205ENST00000432057 TLR9Q9NR96 1032 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 STK38LQ9Y2H1 464 aa19.59■□□□□ 0.73
VRK2-205ENST00000432057 C2orf81A6NN90 581 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 ZNF195O14628 629 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 WISP3O95389 354 aaPredicted RBP19.58■□□□□ 0.73
VRK2-205ENST00000432057 CHRNGP07510 517 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 LTA4HP09960 611 aaKnown RBP19.58■□□□□ 0.73
VRK2-205ENST00000432057 HNRNPH1P31943 449 aaKnown RBP19.58■□□□□ 0.73
VRK2-205ENST00000432057 CD70P32970 193 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 ALDH18A1P54886 795 aaKnown RBP19.58■□□□□ 0.73
VRK2-205ENST00000432057 FAM83EQ2M2I3 478 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 AFTPHQ6ULP2 937 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 TMEM207Q6UWW9 146 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 C7orf61Q8IZ16 206 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 OR6K2Q8NGY2 324 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 RIN3Q8TB24 985 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 UTP4Q969X6 686 aaKnown RBP19.58■□□□□ 0.73
VRK2-205ENST00000432057 CDH19Q9H159 772 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 MAN1C1Q9NR34 630 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 DNAJC28Q9NX36 388 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 LNPEPQ9UIQ6 1025 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 ATG2AQ2TAZ0 1938 aa19.58■□□□□ 0.73
VRK2-205ENST00000432057 A0A0U1RQS6 177 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 FDXRP22570 491 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 MPSTP25325 297 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 PRKAA2P54646 552 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 NAGLUP54802 743 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 RCN2Q14257 317 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 KRT72Q14CN4 511 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 TEAD2Q15562 447 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 TYSND1Q2T9J0 566 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 VWA5B1Q5TIE3 1220 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 TREML1Q86YW5 311 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 TXNDC5Q8NBS9 432 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms