RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ESRP1Q6NXG1 681 aaKnown RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 GDPD4Q6W3E5 623 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 GLT6D1Q7Z4J2 308 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 SFTPA1Q8IWL2 248 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 CTAGE3PQ8IX95 158 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 CNPY4Q8N129 248 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 NDUFAF2Q8N183 169 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 KRT222Q8N1A0 295 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 PPM1NQ8N819 430 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 STYXQ8WUJ0 223 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 PPANQ9NQ55 473 aaKnown RBP18.3■□□□□ 0.52
HMGN1-206ENST00000431390 OGFRQ9NZT2 677 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 IL36AQ9UHA7 158 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 ZNF180Q9UJW8 692 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 PHTF1Q9UMS5 762 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 PPIL1Q9Y3C6 166 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 SPO11Q9Y5K1 396 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 IKBKGQ9Y6K9 419 aa18.3■□□□□ 0.52
HMGN1-206ENST00000431390 A0A0J9YYE9 177 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 C2orf81A6NN90 581 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 CXorf49A8MYA2 514 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-206ENST00000431390 RNF40O75150 1001 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 TRBC1P01850 177 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 PRKCGP05129 697 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 INHBAP08476 426 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 PIRTP0C851 137 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 PSMA3P25788 255 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 SLC8A1P32418 973 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 PFKPQ01813 784 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 TDGQ13569 410 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 CNGA3Q16281 694 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 SERPINA13PQ6UXR4 307 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 KCNMB4Q86W47 210 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 SLC26A11Q86WA9 606 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 RASSF3Q86WH2 238 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 UNC5BQ8IZJ1 945 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 PAF1Q8N7H5 531 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 HCAR2Q8TDS4 363 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 DCAKDQ8WVC6 231 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 MSANTD3Q96H12 275 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 C20orf96Q9NUD7 363 aaPredicted RBP18.29■□□□□ 0.52
HMGN1-206ENST00000431390 ZFATQ9P243 1243 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 CTNNAL1Q9UBT7 734 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 SLC2A6Q9UGQ3 507 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 SUN2Q9UH99 717 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 DUSP12Q9UNI6 340 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 DCHS1Q96JQ0 3298 aa18.29■□□□□ 0.52
HMGN1-206ENST00000431390 TSPAN11A1L157 253 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 UGT2B4P06133 528 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 ERVK-10P10266 1014 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 GLULP15104 373 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 OAS2P29728 719 aaKnown RBP18.28■□□□□ 0.52
HMGN1-206ENST00000431390 ARCN1P48444 511 aaKnown RBP18.28■□□□□ 0.52
HMGN1-206ENST00000431390 ENPP2Q13822 863 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 SKIDA1Q1XH10 827 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 BRAT1Q6PJG6 821 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 MDGA1Q8NFP4 955 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 OR13J1Q8NGT2 312 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 TLCD1Q96CP7 247 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 LYSMD1Q96S90 227 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 MTG2Q9H4K7 406 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 FBRSL1Q9HCM7 1045 aaKnown RBP18.28■□□□□ 0.52
HMGN1-206ENST00000431390 NSMCE4AQ9NXX6 385 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 BCCIPQ9P287 314 aaKnown RBP eCLIP18.28■□□□□ 0.52
HMGN1-206ENST00000431390 FBXL21Q9UKT6 434 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 HCN2Q9UL51 889 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 ARL5AQ9Y689 179 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 PIAS3Q9Y6X2 628 aa18.28■□□□□ 0.52
HMGN1-206ENST00000431390 CCDC78A2IDD5 438 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 CAPN8A6NHC0 703 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 LEFTY1O75610 366 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 PIAS1O75925 651 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 IL12RB1P42701 662 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 ZNF140P52738 457 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-206ENST00000431390 POLR2LP62875 67 aaKnown RBP18.27■□□□□ 0.52
HMGN1-206ENST00000431390 ANGPT1Q15389 498 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 C9orf64Q5T6V5 341 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 TEDDM1Q5T9Z0 273 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 EGFLAMQ63HQ2 1017 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 ZSWIM9Q86XI8 627 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 SIX5Q8N196 739 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 ZNF366Q8N895 744 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 GABPB2Q8TAK5 448 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-206ENST00000431390 GRIN3AQ8TCU5 1115 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 OR8D1Q8WZ84 308 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 MRRFQ96E11 262 aaKnown RBP18.27■□□□□ 0.52
HMGN1-206ENST00000431390 KLHL32Q96NJ5 620 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 C19orf43Q9BQ61 176 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 NLE1Q9NVX2 485 aaPredicted RBP18.27■□□□□ 0.52
HMGN1-206ENST00000431390 DKK3Q9UBP4 350 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 NOVA2Q9UNW9 492 aaKnown RBP18.27■□□□□ 0.52
HMGN1-206ENST00000431390 ZNF711Q9Y462 761 aa18.27■□□□□ 0.52
HMGN1-206ENST00000431390 K7EQS6 105 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 SLC7A4O43246 635 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 NARSO43776 548 aaKnown RBP18.26■□□□□ 0.51
HMGN1-206ENST00000431390 SIN3BO75182 1162 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 VAPBO95292 243 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 PRNPP04156 253 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 CTSLP07711 333 aa18.26■□□□□ 0.51
HMGN1-206ENST00000431390 HLA-EP13747 358 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms