RNA–Protein interactions for RNA: ENST00000430013.1

CBS-205, Transcript of cystathionine-beta-synthase, human

TSL 5

Gene CBS, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBS-205	ENST00000430013	PCDH19	Q8TAB3	1148 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	SNIP1	Q8TAD8	396 aa	Known RBP	18.91	■□□□□ 0.62
CBS-205	ENST00000430013	FAM71B	Q8TC56	605 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	ATXN7L3B	Q96GX2	97 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	NAF1	Q96HR8	494 aa	Known RBP	18.91	■□□□□ 0.62
CBS-205	ENST00000430013	TBATA	Q96M53	351 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	ZNF599	Q96NL3	588 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	DEPDC7	Q96QD5	511 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	FGF22	Q9HCT0	170 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	ENTPD2	Q9Y5L3	495 aa		18.91	■□□□□ 0.62
CBS-205	ENST00000430013	TOR1B	O14657	336 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	CBFA2T2	O43439	604 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	PROSC	O94903	275 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	ABCG1	P45844	678 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	AP1S1	P61966	158 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	GABRE	P78334	506 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	MTM1	Q13496	603 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	HADH	Q16836	314 aa	Known RBP	18.9	■□□□□ 0.62
CBS-205	ENST00000430013	NCBP2-AS2	Q69YL0	99 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	RFLNA	Q6ZTI6	216 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	PDCD6IP	Q8WUM4	868 aa	Known RBP	18.9	■□□□□ 0.62
CBS-205	ENST00000430013	WDR92	Q96MX6	357 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	ABHD10	Q9NUJ1	306 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	SPTLC3	Q9NUV7	552 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	KL	Q9UEF7	1012 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	PADI4	Q9UM07	663 aa		18.9	■□□□□ 0.62
CBS-205	ENST00000430013	SMG1	Q96Q15	3661 aa	Known RBP	18.9	■□□□□ 0.62
CBS-205	ENST00000430013	CFAP69	A5D8W1	941 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	RASGRP1	O95267	797 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	FUCA1	P04066	466 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	H2AFZ	P0C0S5	128 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	ELFN1	P0C7U0	828 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	CTSE	P14091	401 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	RENBP	P51606	427 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	PDX1	P52945	283 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	TRIM14	Q14142	442 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	ACOX1	Q15067	660 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	CNGA3	Q16281	694 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	DENND2C	Q68D51	928 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	H2AFV	Q71UI9	128 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	CCL4L1	Q8NHW4	92 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	PTCD2	Q8WV60	388 aa	Known RBP	18.89	■□□□□ 0.61
CBS-205	ENST00000430013	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	18.89	■□□□□ 0.61
CBS-205	ENST00000430013	PRR11	Q96HE9	360 aa	Predicted RBP	18.89	■□□□□ 0.61
CBS-205	ENST00000430013	COQ10A	Q96MF6	247 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	NUDCD1	Q96RS6	583 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	CCDC3	Q9BQI4	270 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	MGME1	Q9BQP7	344 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	DEF6	Q9H4E7	631 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	UVRAG	Q9P2Y5	699 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	SATB2	Q9UPW6	733 aa		18.89	■□□□□ 0.61
CBS-205	ENST00000430013	AKR1B10	O60218	316 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	MFAP3L	O75121	409 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	LHCGR	P22888	699 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	HTR1B	P28222	390 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	SERPINB6	P35237	376 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	ACTN2	P35609	894 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	TRIM23	P36406	574 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	LSS	P48449	732 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	ELOC	Q15369	112 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	C3orf38	Q5JPI3	329 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	HSD11B1L	Q7Z5J1	315 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	TSPAN33	Q86UF1	283 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	SPACA3	Q8IXA5	215 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	CBARP	Q8N350	705 aa	Predicted RBP	18.88	■□□□□ 0.61
CBS-205	ENST00000430013	FSTL5	Q8N475	847 aa	Predicted RBP	18.88	■□□□□ 0.61
CBS-205	ENST00000430013	KCTD6	Q8NC69	237 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	HIC2	Q96JB3	615 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	RBM15	Q96T37	977 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
CBS-205	ENST00000430013	TMEM168	Q9H0V1	697 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	PRORY	Q9H606	182 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	POLR1B	Q9H9Y6	1135 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	NT5M	Q9NPB1	228 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	ASCL3	Q9NQ33	180 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	EVA1B	Q9NVM1	165 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	RCOR3	Q9P2K3	495 aa	Predicted RBP	18.88	■□□□□ 0.61
CBS-205	ENST00000430013	GPR34	Q9UPC5	381 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	DOLK	Q9UPQ8	538 aa		18.88	■□□□□ 0.61
CBS-205	ENST00000430013	FASN	P49327	2511 aa	Known RBP	18.88	■□□□□ 0.61
CBS-205	ENST00000430013	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	18.87	■□□□□ 0.61
CBS-205	ENST00000430013	SSU72P8	A0A1W2PR75	194 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	NPIPB15	A6NHN6	443 aa	Predicted RBP	18.87	■□□□□ 0.61
CBS-205	ENST00000430013	TNF	P01375	233 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	PDHA1	P08559	390 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	TMEM253	P0C7T8	217 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	CTPS1	P17812	591 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	MMP13	P45452	471 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	BLK	P51451	505 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	POLR2L	P62875	67 aa	Known RBP	18.87	■□□□□ 0.61
CBS-205	ENST00000430013	CCL7	P80098	99 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	MESD	Q14696	234 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	ANKRD20A8P	Q5CZ79	823 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	MARC1	Q5VT66	337 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	PNCK	Q6P2M8	343 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
CBS-205	ENST00000430013	PQLC3	Q8N755	202 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	CCDC74A	Q96AQ1	378 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.87	■□□□□ 0.61
CBS-205	ENST00000430013	NCKIPSD	Q9NZQ3	722 aa		18.87	■□□□□ 0.61
CBS-205	ENST00000430013	DGKB	Q9Y6T7	804 aa		18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms