RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 IRAK3Q9Y616 596 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 I3L521 148 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 NDUFB10O96000 172 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RB1P06400 928 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MAGEA3P43357 314 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PPP4CP60510 307 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PSME3P61289 254 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RHOUQ7L0Q8 258 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 KAT2AQ92830 837 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 TRMT13Q9NUP7 481 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 POMPQ9Y244 141 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 LRRC74AQ0VAA2 488 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FRMD6Q96NE9 622 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC30A2Q9BRI3 323 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RIOX1Q9H6W3 641 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 CYTH4Q9UIA0 394 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 KCNH4Q9UQ05 1017 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MTF2Q9Y483 593 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FAM170BA6NMN3 283 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 C2orf81A6NN90 581 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RBP3P10745 1247 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MNDAP41218 407 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MXD4Q14582 209 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 HECTD3Q5T447 861 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RNF139Q8WU17 664 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 RFT1Q96AA3 541 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 TAS2R7Q9NYW3 318 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 MTRRQ9UBK8 725 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ACAD8Q9UKU7 415 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PIM1P11309 404 aaPredicted RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 GJA1P17302 382 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 HLA-FP30511 346 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ATP12AP54707 1039 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 WDR72Q3MJ13 1102 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 ADGRD1Q6QNK2 874 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 HACD2Q6Y1H2 254 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 PEX13Q92968 403 aa7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 NARS2Q96I59 477 aaKnown RBP7.55□□□□□ -1.2
SYNPO2-202ENST00000429713 FAM240BA0A1B0GVZ2 78 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CAPN8A6NHC0 703 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PMM2O15305 246 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CCNDBP1O95273 360 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CLTBP09497 229 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 LCP1P13796 627 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 XRCC1P18887 633 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MYF6P23409 242 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 DLG2Q15700 870 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PYHIN1Q6K0P9 492 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 FASTKD5Q7L8L6 764 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 KDELC2Q7Z4H8 507 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SCUBE3Q8IX30 993 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 TFB1MQ8WVM0 346 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 NXNL1Q96CM4 212 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 HSPBAP1Q96EW2 488 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CEP295NLQ96MC4 621 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MXRA8Q9BRK3 442 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ENTPD7Q9NQZ7 604 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 REXO2Q9Y3B8 237 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SGTAO43765 313 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MYL12AP19105 171 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ADRA1DP25100 572 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MAGEA6P43360 314 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CYP4Z2PQ8N1L4 340 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 VGLL2Q8N8G2 317 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 THRSPQ92748 146 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MASTLQ96GX5 879 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 LRIG2O94898 1065 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SBK2P0C263 348 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 GRIA1P42261 906 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MLLT3P42568 568 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ANXA11P50995 505 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 BAP1Q92560 729 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 WASH4PA8MWX3 477 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SCN2BO60939 215 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CD72P21854 359 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 TXNL4AP83876 142 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RBBP7Q16576 425 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 GRTP1Q5TC63 336 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 METTL23Q86XA0 190 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 ADAMTS16Q8TE57 1224 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 NKD2Q969F2 451 aaPredicted RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PHOX2BQ99453 314 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SYTL2Q9HCH5 934 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 MAN2B2Q9Y2E5 1009 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 GMDSO60547 372 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RPL4P36578 427 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 CBX5P45973 191 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 HSPA14Q0VDF9 509 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 HMGN3Q15651 99 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 RC3H1Q5TC82 1133 aaKnown RBP7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 OR8H1Q8NGG4 311 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 SIK2Q9H0K1 926 aa7.54□□□□□ -1.2
SYNPO2-202ENST00000429713 PDGFCQ9NRA1 345 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms