RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
LINC00887-203ENST00000429578 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00887-203ENST00000429578 ZC3H7BQ9UGR2 993 aaKnown RBP17.12■□□□□ 0.33
LINC00887-203ENST00000429578 SCML1Q9UN30 329 aa17.12■□□□□ 0.33
LINC00887-203ENST00000429578 SOX13Q9UN79 622 aa17.12■□□□□ 0.33
LINC00887-203ENST00000429578 TCAF1Q9Y4C2 921 aa17.12■□□□□ 0.33
LINC00887-203ENST00000429578 DOCK9Q9BZ29 2069 aa17.12■□□□□ 0.33
LINC00887-203ENST00000429578 PI15O43692 258 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 CRTAMO95727 393 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 ADRB3P13945 408 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 XPAP23025 273 aaPredicted RBP17.11■□□□□ 0.33
LINC00887-203ENST00000429578 DRD3P35462 400 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 ABL2P42684 1182 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 NEK3P51956 506 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 PMS2P54278 862 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 PTPRRQ15256 657 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 TRMT10CQ7L0Y3 403 aaKnown RBP17.11■□□□□ 0.33
LINC00887-203ENST00000429578 GLT6D1Q7Z4J2 308 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 TMEM135Q86UB9 458 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 CACUL1Q86Y37 369 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 AADATQ8N5Z0 425 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 MDGA1Q8NFP4 955 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 MRGPRX1Q96LB2 322 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 SEMA4AQ9H3S1 761 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 CHRAC1Q9NRG0 131 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 POLR3BQ9NW08 1133 aaPredicted RBP17.11■□□□□ 0.33
LINC00887-203ENST00000429578 NUMA1Q14980 2115 aa17.11■□□□□ 0.33
LINC00887-203ENST00000429578 FAM237BA0A1B0GVD1 139 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 TCRBV21S2A2A0A5A6 115 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 MROH6A6NGR9 719 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 NPIPB15A6NHN6 443 aaPredicted RBP17.1■□□□□ 0.33
LINC00887-203ENST00000429578 LDB2O43679 373 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 DNTTP04053 509 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PGAM1P18669 254 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 CCDC15Q0P6D6 951 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 SEPT6Q14141 434 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 TAF1AQ15573 450 aaPredicted RBP17.1■□□□□ 0.33
LINC00887-203ENST00000429578 CDKN3Q16667 212 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 KYNUQ16719 465 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 LRRC73Q5JTD7 316 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
LINC00887-203ENST00000429578 FBXO38Q6PIJ6 1188 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 NLRP9Q7RTR0 991 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PALM2Q8IXS6 379 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 SPEM1Q8N4L4 309 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 RAB7BQ96AH8 199 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 SIPA1Q96FS4 1042 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 TTC25Q96NG3 672 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PABPC3Q9H361 631 aaKnown RBP17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PCDH12Q9NPG4 1184 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 ZNF711Q9Y462 761 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 C2orf81A6NN90 581 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 AURKAO14965 403 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 USP1O94782 785 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 TTC4O95801 387 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 POLBP06746 335 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 CYP2A6P11509 494 aaPredicted RBP17.1■□□□□ 0.33
LINC00887-203ENST00000429578 GABRG2P18507 467 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 NDUFV2P19404 249 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 P2RY2P41231 377 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 FAM193AP78312 1265 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PDE1BQ01064 536 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 CNTN1Q12860 1018 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PIP5KL1Q5T9C9 394 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 ERAP2Q6P179 960 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 MREGQ8N565 214 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PEX13Q92968 403 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 TRIM56Q9BRZ2 755 aaKnown RBP17.1■□□□□ 0.33
LINC00887-203ENST00000429578 IER2Q9BTL4 223 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 SLC6A17Q9H1V8 727 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 ZFYVE1Q9HBF4 777 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 LRRC4CQ9HCJ2 640 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 ARFGAP3Q9NP61 516 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 NINJ2Q9NZG7 142 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 B4GALT6Q9UBX8 382 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 ARL5AQ9Y689 179 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 RPS6KL1Q9Y6S9 549 aa17.1■□□□□ 0.33
LINC00887-203ENST00000429578 PLXNA2O75051 1894 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 C1orf232A0A0U1RR37 186 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 PLK4O00444 970 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 PAPSS2O95340 614 aaPredicted RBP17.09■□□□□ 0.33
LINC00887-203ENST00000429578 HMGCLP35914 325 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 ELP6Q0PNE2 266 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 TTC31Q49AM3 519 aaPredicted RBP17.09■□□□□ 0.33
LINC00887-203ENST00000429578 CRTC1Q6UUV9 634 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 DPPA4Q7L190 304 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 LYSMD3Q7Z3D4 306 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 TTC30BQ8N4P2 665 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 HDDC3Q8N4P3 179 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 FAM131CQ96AQ9 280 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 MFSD3Q96ES6 412 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 ZNF778Q96MU6 729 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 OMDQ99983 421 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 GPR63Q9BZJ6 419 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 C2orf42Q9NWW7 574 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 FBXL12Q9NXK8 326 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 RIMKLBQ9ULI2 386 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.09■□□□□ 0.33
LINC00887-203ENST00000429578 EML5Q05BV3 1969 aa17.09■□□□□ 0.33
LINC00887-203ENST00000429578 PLXND1Q9Y4D7 1925 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms