RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 SOCS4Q8WXH5 440 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 TFAP2CQ92754 450 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 ZNF419Q96HQ0 510 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 IL12RB2Q99665 862 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 UNKQ9C0B0 810 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 RNF39Q9H2S5 420 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 TRPC7Q9HCX4 862 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SPAG4Q9NPE6 437 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SLC38A7Q9NVC3 462 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 ARMC1Q9NVT9 282 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 GNPTGQ9UJJ9 305 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 GINS2Q9Y248 185 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 AAR2Q9Y312 384 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 TCAF1Q9Y4C2 921 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SNX10Q9Y5X0 201 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 NYNRINQ9P2P1 1898 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 MIA3Q5JRA6 1907 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 TRIP12Q14669 1992 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 A8MT66 165 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 PSMD12O00232 456 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 DLGAP1O14490 977 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 UBDO15205 165 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 NRP2O60462 931 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 CELF2O95319 508 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 SNRPB2P08579 225 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 CCNCP24863 283 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 LRPAP1P30533 357 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 ATP4BP51164 291 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 KPNA2P52292 529 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 CRYBB1P53674 252 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 MAP3K7CLP57077 242 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 RPS3AP61247 264 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 RALGDSQ12967 914 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SEPT6Q14141 434 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 CYTH1Q15438 398 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 DEFB115Q30KQ5 88 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 ARL13BQ3SXY8 428 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 AGKQ53H12 422 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SAMD4BQ5PRF9 694 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 ZNF362Q5T0B9 420 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 ARTNQ5T4W7 220 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 BTBD8Q5XKL5 378 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 KIAA0930Q6ICG6 404 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 SLC2A7Q6PXP3 512 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 LARP4Q71RC2 724 aaKnown RBP eCLIP8.86□□□□□ -0.99
CDH13-202ENST00000428848 GPRIN1Q7Z2K8 1008 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 PTAR1Q7Z6K3 402 aaPredicted RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 CUZD1Q86UP6 607 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 GPR180Q86V85 440 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 MYO1HQ8N1T3 1032 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 MFSD2AQ8NA29 543 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SPATA22Q8NHS9 363 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 CCDC126Q96EE4 140 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SMOQ99835 787 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 GPATCH1Q9BRR8 931 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 TMEM79Q9BSE2 394 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 SLC25A23Q9BV35 468 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 CRTAC1Q9NQ79 661 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 TMEM30AQ9NV96 361 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 KLK14Q9P0G3 267 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 OR12D3Q9UGF7 316 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 CNOT6Q9ULM6 557 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 ABT1Q9ULW3 272 aaKnown RBP8.86□□□□□ -0.99
CDH13-202ENST00000428848 SLC8A2Q9UPR5 921 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 TSC22D4Q9Y3Q8 395 aa8.86□□□□□ -0.99
CDH13-202ENST00000428848 C17orf102A2RUQ5 167 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 HHLA1C9JL84 531 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 IPO13O94829 963 aaKnown RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 WISP3O95389 354 aaPredicted RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 MT-CYBP00156 380 aaPredicted RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 F9P00740 461 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 PSEN2P49810 448 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 RABGGTBP53611 331 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 PRKCQQ04759 706 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 EIF4EBP2Q13542 120 aaPredicted RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 POU6F1Q14863 301 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 PPP1R3AQ16821 1122 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 KCTD21Q4G0X4 260 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 MORN1Q5T089 497 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 CST9Q5W186 159 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 WSCD1Q658N2 575 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 TAF2Q6P1X5 1199 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 ARHGAP36Q6ZRI8 547 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 ERMP1Q7Z2K6 904 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 NANOGNBQ7Z5D8 188 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 FUNDC1Q8IVP5 155 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 ARHGAP12Q8IWW6 846 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 CACTIN-AS1Q8N1I8 211 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 CENPSQ8N2Z9 138 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 PACRGLQ8N7B6 248 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 TERB1Q8NA31 727 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 ZUFSPQ96AP4 578 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 EFHD2Q96C19 240 aaPredicted RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 RMND5BQ96G75 393 aaPredicted RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 CELF6Q96J87 481 aaKnown RBP8.85□□□□□ -0.99
CDH13-202ENST00000428848 PLEKHA8Q96JA3 519 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 ELMO2Q96JJ3 720 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 OSMRQ99650 979 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 RHOBTB2Q9BYZ6 727 aa8.85□□□□□ -0.99
CDH13-202ENST00000428848 TKTL2Q9H0I9 626 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms