RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 PRNPP04156 253 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 IVLP07476 585 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 F7P08709 466 aaPredicted RBP10.87□□□□□ -0.67
CRIM1-204ENST00000428774 ERVK-10P10266 1014 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 GLULP15104 373 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 COL9A1P20849 921 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 LHCGRP22888 699 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 HNF1BP35680 557 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 ARCN1P48444 511 aaKnown RBP10.87□□□□□ -0.67
CRIM1-204ENST00000428774 PSMD8P48556 350 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 TMPRSS15P98073 1019 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 SEMG2Q02383 582 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 GRSF1Q12849 480 aaKnown RBP eCLIP10.87□□□□□ -0.67
CRIM1-204ENST00000428774 RALGDSQ12967 914 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 CAMK2GQ13555 558 aaPredicted RBP10.87□□□□□ -0.67
CRIM1-204ENST00000428774 CCINQ13939 588 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 CDKN3Q16667 212 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 C2orf27AQ580R0 203 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 TTMPQ5BVD1 217 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 ZNF805Q5CZA5 627 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 BRAT1Q6PJG6 821 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 TSPAN33Q86UF1 283 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 KCNMB4Q86W47 210 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 PIAS4Q8N2W9 510 aaPredicted RBP10.87□□□□□ -0.67
CRIM1-204ENST00000428774 IL17RCQ8NAC3 791 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 PIP4K2CQ8TBX8 421 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 DCAKDQ8WVC6 231 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 ARL8AQ96BM9 186 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 EID2BQ96D98 161 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 MRRFQ96E11 262 aaKnown RBP10.87□□□□□ -0.67
CRIM1-204ENST00000428774 LYSMD1Q96S90 227 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 CYTH2Q99418 400 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 TMBIM4Q9HC24 238 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 MAGEE1Q9HCI5 957 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 DKK3Q9UBP4 350 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 B4GALT6Q9UBX8 382 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 FETUBQ9UGM5 382 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 SUN2Q9UH99 717 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 RIMKLBQ9ULI2 386 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 PPM1HQ9ULR3 514 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 PPIL1Q9Y3C6 166 aa10.87□□□□□ -0.67
CRIM1-204ENST00000428774 TECTAO75443 2155 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 C1orf232A0A0U1RR37 186 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 TLDC2A0PJX2 215 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 OR51F1A6NGY5 319 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 GOLGA8KD6RF30 607 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 C1QTNF3-AMACRE9PGA6 284 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 GOLGA8TH3BQL2 631 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 PLK4O00444 970 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 KPNA3O00505 521 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 NPC1O15118 1278 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 RNF40O75150 1001 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 RPP40O75818 363 aaKnown RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 FAM155BO75949 473 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CRTAMO95727 393 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 C1SP09871 688 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 HOXB2P14652 356 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 PSMA3P25788 255 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 ITGB7P26010 798 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 NTSR1P30989 418 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 COPAP53621 1224 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 NAB1Q13506 487 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 TMED2Q15363 201 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CNGA3Q16281 694 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 PDPK2PQ6A1A2 396 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 ZNF449Q6P9G9 518 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CRTC1Q6UUV9 634 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 USP45Q70EL2 814 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CYS1Q717R9 158 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 NLRP9Q7RTR0 991 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CACUL1Q86Y37 369 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 TDRPQ86YL5 185 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 MMAAQ8IVH4 418 aaKnown RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CTAGE3PQ8IX95 158 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 SIX5Q8N196 739 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 PPM1NQ8N819 430 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 TXNDC5Q8NBS9 432 aaKnown RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 TMIEQ8NEW7 156 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 OR4K2Q8NGD2 314 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 STYXQ8WUJ0 223 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 SLC44A1Q8WWI5 657 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 PEX13Q92968 403 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 ROPN1BQ9BZX4 212 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 FOXQ1Q9C009 403 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 EPHX3Q9H6B9 360 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 ROPN1Q9HAT0 212 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 CD248Q9HCU0 757 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 ARHGEF3Q9NR81 526 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 NLE1Q9NVX2 485 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 FAM53CQ9NYF3 392 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 VPS18Q9P253 973 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 PSMC3IPQ9P2W1 217 aaPredicted RBP10.86□□□□□ -0.67
CRIM1-204ENST00000428774 LGALS13Q9UHV8 139 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 SLC24A2Q9UI40 661 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 FKBPLQ9UIM3 349 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 FBXL21Q9UKT6 434 aa10.86□□□□□ -0.67
CRIM1-204ENST00000428774 NDRG2Q9UN36 371 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms