RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SHEQ5VZ18 495 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 LCN8Q6JVE9 175 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF746Q6NUN9 644 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 GJB7Q6PEY0 223 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARSKQ6UWY0 536 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PLEKHM3Q6ZWE6 761 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ILDR2Q71H61 639 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FBXO11Q86XK2 927 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 STX12Q86Y82 276 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PHF13Q86YI8 300 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 DDIASQ8IXT1 998 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBQLNLQ8IYU4 475 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MPP5Q8N3R9 675 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MYCT1Q8N699 235 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 XXYLT1Q8NBI6 393 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ATAD1Q8NBU5 361 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PSD4Q8NDX1 1056 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRPV3Q8NET8 790 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 BPIFB6Q8NFQ5 453 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TTLQ8NG68 377 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 OR10T2Q8NGX3 314 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 VANGL1Q8TAA9 524 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 OLIG1Q8TAK6 271 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FEZF2Q8TBJ5 459 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC16A10Q8TF71 515 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 IPCEF1Q8WWN9 437 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 JDP2Q8WYK2 163 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 LRTOMTQ8WZ04 291 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNX19Q92543 992 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SGCDQ92629 289 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 HTRA1Q92743 480 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TANKQ92844 425 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 RPL3LQ92901 407 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MYDGFQ969H8 173 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF566Q969W8 418 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SH3KBP1Q96B97 665 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAP6Q96JE9 813 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARL5BQ96KC2 179 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 HYLS1Q96M11 299 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ZNF512Q96ME7 567 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 CITED4Q96RK1 184 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 KLF6Q99612 283 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC29A1Q99808 456 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM118BQ9BPY3 351 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 OCSTAMPQ9BR26 566 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 GTPBP2Q9BX10 602 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TEKT3Q9BXF9 490 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 HEMGNQ9BXL5 484 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 FTHL17Q9BXU8 183 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 IL22Q9GZX6 179 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC22A4Q9H015 551 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 RSAD1Q9HA92 442 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM8AQ9HCN3 771 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TIGARQ9NQ88 270 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 DYRK4Q9NR20 520 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ABCB10Q9NRK6 738 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 AGPAT3Q9NRZ7 376 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM45AQ9NWC5 275 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 DUS2Q9NX74 493 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 PAQR5Q9NXK6 330 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TAS2R9Q9NYW1 312 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 GLTPQ9NZD2 209 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAT2BQ9NZL9 334 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACTR3BQ9P1U1 418 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC9A2Q9UBY0 812 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 C3orf18Q9UK00 162 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 ACAD8Q9UKU7 415 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 STAP1Q9ULZ2 295 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 TMEM5Q9Y2B1 443 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 KLHL20Q9Y2M5 609 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 NDUFAF1Q9Y375 327 aa5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 MTF2Q9Y483 593 aaPredicted RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 COPG1Q9Y678 874 aaKnown RBP5.63□□□□□ -1.51
VTI1BP4-201ENST00000427516 COL24A1Q17RW2 1714 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MYH14Q7Z406 1995 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PNMA6FA0A0J9YX94 578 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MYOCOSA0A1B0GUC4 107 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM170AA1A519 330 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 LINC00862A6NCI5 91 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 KRT87PA6NCN2 255 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CCDC182A6NF36 153 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 OR5K4A6NMS3 321 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 WDR64B1ANS9 1081 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 USP17L12C9JPN9 530 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 USP17L21D6R901 530 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRSS44E7EML9 344 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 ATP6V1G2-DDX39BF2Z307 99 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 H0Y858 1186 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 H0YCG3 227 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 hCG_2039718K7EN88 272 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNAP23O00161 211 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TOR1AO14656 332 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRKAB2O43741 272 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CNTN5O94779 1100 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 APOL3O95236 402 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 NPPAP01160 153 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 APOC1P02654 83 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNRPB2P08579 225 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PSKH1P11801 424 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms