RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 FAF2Q96CS3 445 aa18.48■□□□□ 0.55
GPC1-205ENST00000427506 ZNF830Q96NB3 372 aaPredicted RBP18.48■□□□□ 0.55
GPC1-205ENST00000427506 RNF157Q96PX1 679 aa18.48■□□□□ 0.55
GPC1-205ENST00000427506 MAK16Q9BXY0 300 aaKnown RBP18.48■□□□□ 0.55
GPC1-205ENST00000427506 CLPBQ9H078 707 aa18.48■□□□□ 0.55
GPC1-205ENST00000427506 RBM22Q9NW64 420 aaKnown RBP eCLIP18.48■□□□□ 0.55
GPC1-205ENST00000427506 RAI2Q9Y5P3 530 aa18.48■□□□□ 0.55
GPC1-205ENST00000427506 U3KQA8 63 aa18.48■□□□□ 0.55
GPC1-205ENST00000427506 ANKRD36A6QL64 1941 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 YY2O15391 372 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 TNFP01375 233 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 ALPIP09923 528 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 KRT10P13645 584 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 TNNT1P13805 278 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 KELP23276 732 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 GBE1Q04446 702 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 TBX2Q13207 712 aaPredicted RBP18.47■□□□□ 0.55
GPC1-205ENST00000427506 ARHGEF7Q14155 803 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 CNGA3Q16281 694 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 C6orf132Q5T0Z8 1188 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 ESRP1Q6NXG1 681 aaKnown RBP18.47■□□□□ 0.55
GPC1-205ENST00000427506 GUSBP11Q6P575 273 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 SARM1Q6SZW1 724 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 USP45Q70EL2 814 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 EFL1Q7Z2Z2 1120 aaKnown RBP18.47■□□□□ 0.55
GPC1-205ENST00000427506 PQLC3Q8N755 202 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 LRRN4Q8WUT4 740 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 MAML1Q92585 1016 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 NUS1Q96E22 293 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 TSGA13Q96PP4 275 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 KCTD5Q9NXV2 234 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 DKK4Q9UBT3 224 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 MOSPD1Q9UJG1 213 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 RAXQ9Y2V3 346 aa18.47■□□□□ 0.55
GPC1-205ENST00000427506 ARID1BQ8NFD5 2236 aaPredicted RBP18.46■□□□□ 0.55
GPC1-205ENST00000427506 MTA2O94776 668 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 HEXIM1O94992 359 aaKnown RBP18.46■□□□□ 0.55
GPC1-205ENST00000427506 KRT1P04264 644 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 CELA2BP08218 269 aaPredicted RBP18.46■□□□□ 0.55
GPC1-205ENST00000427506 CCNB1P14635 433 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 CTPS1P17812 591 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 CES1P23141 567 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 EPHB1P54762 984 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 KIAA1024LP59773 190 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 PNCKQ6P2M8 343 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 GKN2Q86XP6 184 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 CACTIN-AS1Q8N1I8 211 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 DCBLD1Q8N8Z6 715 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 OR56A4Q8NGH8 313 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 FUBP1Q96AE4 644 aaKnown RBP18.46■□□□□ 0.55
GPC1-205ENST00000427506 SCRN2Q96FV2 425 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 COQ10AQ96MF6 247 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 BOCQ9BWV1 1114 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 WDR26Q9H7D7 661 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 DTLQ9NZJ0 730 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 GULP1Q9UBP9 304 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 AMACRQ9UHK6 382 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 INTUQ9ULD6 942 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 HEY1Q9Y5J3 304 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 SPEGQ15772 3267 aa18.46■□□□□ 0.55
GPC1-205ENST00000427506 EME2A4GXA9 379 aaPredicted RBP18.45■□□□□ 0.54
GPC1-205ENST00000427506 GOLGA6CA6NDK9 693 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 GOLGA6BA6NDN3 693 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 TMEM202A6NGA9 273 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 NPIPB15A6NHN6 443 aaPredicted RBP18.45■□□□□ 0.54
GPC1-205ENST00000427506 PDE2AO00408 941 aaPredicted RBP18.45■□□□□ 0.54
GPC1-205ENST00000427506 PDHA1P08559 390 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 GOLGA6DP0CG33 693 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 GM2AP17900 193 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 CA4P22748 312 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 SLC1A1P43005 524 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 NOP2P46087 812 aaKnown RBP18.45■□□□□ 0.54
GPC1-205ENST00000427506 DSC2Q02487 901 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 SLC10A2Q12908 348 aaPredicted RBP18.45■□□□□ 0.54
GPC1-205ENST00000427506 PTPRRQ15256 657 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 NYAP1Q6ZVC0 841 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 RHOT1Q8IXI2 618 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 SLC35F3Q8IY50 421 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 CCDC13Q8IYE1 715 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 TPCN2Q8NHX9 752 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 FATE1Q969F0 183 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 HDAC11Q96DB2 347 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 PDXPQ96GD0 296 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 DEPDC7Q96QD5 511 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 NRSN2Q9GZP1 204 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 GOLGA6AQ9NYA3 693 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 SIRPGQ9P1W8 387 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 LRRK1Q38SD2 2015 aa18.45■□□□□ 0.54
GPC1-205ENST00000427506 ASPMQ8IZT6 3477 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 PSMD11O00231 422 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 APOL1O14791 398 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 SPOPO43791 374 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 HLA-DQB2P05538 268 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 HOXC4P09017 264 aaPredicted RBP18.44■□□□□ 0.54
GPC1-205ENST00000427506 LHCGRP22888 699 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 TRIM23P36406 574 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 ETV3P41162 512 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 MAGEA1P43355 309 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 LVRNQ6Q4G3 990 aa18.44■□□□□ 0.54
GPC1-205ENST00000427506 CRTC1Q6UUV9 634 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms