RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ARHGEF7Q14155 803 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 DPYSL3Q14195 570 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ACOX1Q15067 660 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 PAFAH1B3Q15102 231 aaKnown RBP10.21□□□□□ -0.77
COMMD1-202ENST00000427417 IFI16Q16666 785 aaKnown RBP10.21□□□□□ -0.77
COMMD1-202ENST00000427417 CDKN3Q16667 212 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ALG11Q2TAA5 492 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ASTE1Q2TB18 679 aaPredicted RBP10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ANKRD20A8PQ5CZ79 823 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ARMC12Q5T9G4 340 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 CDCP2Q5VXM1 449 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 NCBP2-AS2Q69YL0 99 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 USP45Q70EL2 814 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 EFL1Q7Z2Z2 1120 aaKnown RBP10.21□□□□□ -0.77
COMMD1-202ENST00000427417 RD3Q7Z3Z2 195 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 CNGA4Q8IV77 575 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 VSTM4Q8IW00 320 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 RHOT2Q8IXI1 618 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 PGBD5Q8N414 524 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 TEX26Q8N6G2 289 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ARL10Q8N8L6 244 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 OR6C4Q8NGE1 309 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 OR56A4Q8NGH8 313 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 FATE1Q969F0 183 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 POLR1EQ9GZS1 481 aaKnown RBP10.21□□□□□ -0.77
COMMD1-202ENST00000427417 TCEAL2Q9H3H9 227 aaPredicted RBP10.21□□□□□ -0.77
COMMD1-202ENST00000427417 WDR26Q9H7D7 661 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 B4GALT6Q9UBX8 382 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 OR1A2Q9Y585 309 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 DGKBQ9Y6T7 804 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 U3KQA8 63 aa10.21□□□□□ -0.77
COMMD1-202ENST00000427417 ANKRD11Q6UB99 2663 aaPredicted RBP10.21□□□□□ -0.78
COMMD1-202ENST00000427417 A0A087WV48 116 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 TNFRSF10CO14798 259 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 MATN3O15232 486 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 YY2O15391 372 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 RRP8O43159 456 aaKnown RBP10.2□□□□□ -0.78
COMMD1-202ENST00000427417 MFSD11O43934 449 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 MFAP3LO75121 409 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 GCATO75600 419 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 TCEA3O75764 348 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 PGLSO95336 258 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 CA4P22748 312 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 CCNCP24863 283 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 ACTN2P35609 894 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 TRIM23P36406 574 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 MAXP61244 160 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 MESDQ14696 234 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 TCEA2Q15560 299 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 ODF2Q5BJF6 829 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 PNCKQ6P2M8 343 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 GUSBP11Q6P575 273 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 LRRC69Q6ZNQ3 347 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 NYAP1Q6ZVC0 841 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 SLC35F3Q8IY50 421 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 LSMEM2Q8N112 164 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 PCDH19Q8TAB3 1148 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 TSACCQ96A04 125 aaPredicted RBP10.2□□□□□ -0.78
COMMD1-202ENST00000427417 FUBP1Q96AE4 644 aaKnown RBP10.2□□□□□ -0.78
COMMD1-202ENST00000427417 FAF2Q96CS3 445 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 NUS1Q96E22 293 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 SCRN2Q96FV2 425 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 ZNF830Q96NB3 372 aaPredicted RBP10.2□□□□□ -0.78
COMMD1-202ENST00000427417 DCBLD2Q96PD2 775 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 TSGA13Q96PP4 275 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 PACSIN1Q9BY11 444 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 CLPBQ9H078 707 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 NHEJ1Q9H9Q4 299 aaPredicted RBP10.2□□□□□ -0.78
COMMD1-202ENST00000427417 NT5MQ9NPB1 228 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 DNPEPQ9ULA0 475 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 PNMA8BQ9ULN7 279 aaPredicted RBP10.2□□□□□ -0.78
COMMD1-202ENST00000427417 RAI2Q9Y5P3 530 aa10.2□□□□□ -0.78
COMMD1-202ENST00000427417 ASXL3Q9C0F0 2248 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 ANKRD36A6QL64 1941 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 TTC24A2A3L6 582 aaPredicted RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 A8MX80 341 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 ZNF487B1APH4 448 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 CASC3O15234 703 aaKnown RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 TLX3O43711 291 aaPredicted RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 BRINP1O60477 761 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 CSO75390 466 aaKnown RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 HEXIM1O94992 359 aaKnown RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 EPHB1P54762 984 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 TRAF2Q12933 501 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 CNGA3Q16281 694 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 ATP13A4Q4VNC1 1196 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 RBM44Q6ZP01 1051 aaKnown RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 PDZD3Q86UT5 571 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 VSIG1Q86XK7 387 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 PLA2G15Q8NCC3 412 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 RNF214Q8ND24 703 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 SLC35G2Q8TBE7 412 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.19□□□□□ -0.78
COMMD1-202ENST00000427417 MAML1Q92585 1016 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 HDAC11Q96DB2 347 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 PDXPQ96GD0 296 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 COQ10AQ96MF6 247 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 NSMCE3Q96MG7 304 aa10.19□□□□□ -0.78
COMMD1-202ENST00000427417 RBM15Q96T37 977 aaKnown RBP eCLIP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms