RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 NSUN2Q08J23 767 aaKnown RBP eCLIP5.28□□□□□ -1.56
LINC00458-202ENST00000427299 CCDC96Q2M329 555 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 GLE1Q53GS7 698 aaKnown RBP5.28□□□□□ -1.56
LINC00458-202ENST00000427299 HYIQ5T013 277 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 ABLIM2Q6H8Q1 611 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 TTI2Q6NXR4 508 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 C8orf74Q6P047 294 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 TMEM65Q6PI78 240 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 SRBD1Q8N5C6 995 aaKnown RBP5.28□□□□□ -1.56
LINC00458-202ENST00000427299 ATG16L2Q8NAA4 619 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 STYXQ8WUJ0 223 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 TBC1D20Q96BZ9 403 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 NSUN4Q96CB9 384 aaKnown RBP5.28□□□□□ -1.56
LINC00458-202ENST00000427299 ZFYVE19Q96K21 471 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 CCDC42Q96M95 316 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 RHOXF2Q9BQY4 288 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
LINC00458-202ENST00000427299 GLT8D2Q9H1C3 349 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 BLZF1Q9H2G9 400 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 SH2D4AQ9H788 454 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 DNAJB11Q9UBS4 358 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 GJD2Q9UKL4 321 aa5.28□□□□□ -1.56
LINC00458-202ENST00000427299 DRG1Q9Y295 367 aaKnown RBP5.28□□□□□ -1.56
LINC00458-202ENST00000427299 FLT1P17948 1338 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 A0A1B0GVC2 190 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 PVALEFA0A1B0GWK0 134 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 GOLGA6L10A6NI86 522 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 B4DGG1 531 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 B4DLN1 442 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 GTPBP1O00178 669 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 SHOX2O60902 331 aaPredicted RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 CBFA2T3O75081 653 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 COQ9O75208 318 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 LCA5LO95447 670 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 HGFP14210 728 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 GCFC2P16383 781 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 NPPBP16860 134 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 TNFAIP3P21580 790 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 HNRNPH3P31942 346 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 EPS15P42566 896 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 MAGEA9P43362 315 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 RPS13P62277 151 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 MECOMQ03112 1051 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 ATP1A4Q13733 1029 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 TTC31Q49AM3 519 aaPredicted RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 ASPRV1Q53RT3 343 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 TMEM63BQ5T3F8 832 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 UBAP2Q5T6F2 1119 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 NCAPH2Q6IBW4 605 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 LIN54Q6MZP7 749 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 RANBP10Q6VN20 620 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 DCDC5Q6ZRR9 648 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 ADGRA1Q86SQ6 560 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 PIM3Q86V86 326 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 SPARTQ8N0X7 666 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 PELI3Q8N2H9 469 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 MMGT1Q8N4V1 131 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 RNF10Q8N5U6 811 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 MAFAQ8NHW3 353 aaPredicted RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 TRAPPC12Q8WVT3 735 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 RRP36Q96EU6 259 aaKnown RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 KATNAL1Q9BW62 490 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 TRIM9Q9C026 710 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 ZMYND12Q9H0C1 365 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 NT5C3AQ9H0P0 336 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 FAM234AQ9H0X4 552 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 SLC25A32Q9H2D1 315 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 HIPK2Q9H2X6 1198 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 NHEJ1Q9H9Q4 299 aaPredicted RBP5.27□□□□□ -1.57
LINC00458-202ENST00000427299 RIC8AQ9NPQ8 531 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 MCM9Q9NXL9 1143 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 HPCAL4Q9UM19 191 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 SNX12Q9UMY4 172 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 GDAQ9Y2T3 454 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 HS3ST3B1Q9Y662 390 aa5.27□□□□□ -1.57
LINC00458-202ENST00000427299 FAM205AQ6ZU69 1335 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 NRXN2Q9P2S2 1712 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SIPA1L1O43166 1804 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TRIM49BA6NDI0 452 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SRRM3A6NNA2 597 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 J3KRW8 73 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 PCDH17O14917 1159 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 NCAM2O15394 837 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 RGS10O43665 173 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 KLRC4O43908 158 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TULP3O75386 442 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 KIAA0754O94854 1291 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TNFRSF6BO95407 300 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 ATP1A1P05023 1023 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 EPB41P11171 864 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 HTR7P34969 479 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 GYG1P46976 350 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TIRAPP58753 221 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TNNC1P63316 161 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SETQ01105 290 aaPredicted RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 SLC9C1Q4G0N8 1177 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 CFAP221Q4G0U5 840 aa5.26□□□□□ -1.57
LINC00458-202ENST00000427299 TDRD12Q587J7 1177 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 DNAJC21Q5F1R6 531 aaKnown RBP5.26□□□□□ -1.57
LINC00458-202ENST00000427299 EARS2Q5JPH6 523 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms