RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PTGES3LE9PB15 166 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 I6L893 689 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 VWA5AO00534 786 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 PAGE4O60829 102 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 GFPT2O94808 682 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 NKX2-2O95096 273 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 IPO7O95373 1038 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 NGFRP08138 427 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 CLTBP09497 229 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 NAGAP17050 411 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 CD58P19256 250 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 PIGAP37287 484 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 RPL3P39023 403 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 PIP4K2AP48426 406 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 DRG2P55039 364 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 F2RL1P55085 397 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ZP1P60852 638 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ROR2Q01974 943 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 CSTF3Q12996 717 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 MYBPC2Q14324 1141 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 CRYMQ14894 314 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ALG11Q2TAA5 492 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ZNF284Q2VY69 593 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 GKAP1Q5VSY0 366 aaPredicted RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TYW3Q6IPR3 259 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TTI2Q6NXR4 508 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 NCEH1Q6PIU2 408 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 CCDC129Q6ZRS4 1044 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 Q6ZSV7 163 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 SHFQ7M4L6 423 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ARHGAP12Q8IWW6 846 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TEX11Q8IYF3 940 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TTC39CQ8N584 583 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TEX45Q8NA69 505 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ARRDC2Q8TBH0 407 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM163Q8TC26 289 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 USP6NLQ92738 828 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ERGIC1Q969X5 290 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TXNDC15Q96J42 360 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 NCAPGQ9BPX3 1015 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM47Q9BQJ4 181 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 SF3B5Q9BWJ5 86 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 STRA6Q9BX79 667 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 TKTL2Q9H0I9 626 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 MUC13Q9H3R2 512 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 SMARCAD1Q9H4L7 1026 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 PLEKHA4Q9H4M7 779 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 SYNCQ9H7C4 482 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 SLC28A3Q9HAS3 691 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 CLK4Q9HAZ1 481 aaKnown RBP2.51□□□□□ -2.01
PTPRC-208ENST00000427110 HCFC1R1Q9NWW0 138 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 OR6C3Q9NZP0 311 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 VPS28Q9UK41 221 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 PROCRQ9UNN8 238 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 ERVK-11Q9UQG0 969 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 PTGDR2Q9Y5Y4 395 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 LYVE1Q9Y5Y7 322 aa2.51□□□□□ -2.01
PTPRC-208ENST00000427110 UTYO14607 1347 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 A0A1B0GVT2 93 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 DYTNA2CJ06 578 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 A6NCN8 305 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 TMEM202A6NGA9 273 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 LIPT2A6NK58 231 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 OR6C75A6NL08 312 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 TIMM23O14925 209 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 SPRY3O43610 288 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 KLK8O60259 260 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 DOK2O60496 412 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 PTP4A3O75365 173 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 NDUFS3O75489 264 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 SLC25A12O75746 678 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 NDUFB4O95168 129 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 MLYCDO95822 493 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 MMP2P08253 660 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 T-ENOLP0DO92 83 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 RARGP13631 454 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 ZNF182P17025 639 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-208ENST00000427110 ALOX12P18054 663 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 CDH2P19022 906 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-208ENST00000427110 AGAP20933 346 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 GNLYP22749 145 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 GPTP24298 496 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 MCM3P25205 808 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 CHATP28329 748 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 TNFRSF8P28908 595 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 C21orf33P30042 268 aaPredicted RBP2.5□□□□□ -2.01
PTPRC-208ENST00000427110 MAPK4P31152 587 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 SHMT1P34896 483 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 RFX2P48378 723 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 NUDT6P53370 316 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 PMS2P54278 862 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 SNX16P57768 344 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 PRAMEP78395 509 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 MC1RQ01726 317 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 TRAF1Q13077 416 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 PRKG2Q13237 762 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 OLIG2Q13516 323 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 NAE1Q13564 534 aa2.5□□□□□ -2.01
PTPRC-208ENST00000427110 HNF4GQ14541 408 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms