RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SLC1A5Q15758 541 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 CDKN3Q16667 212 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 NAPEPLDQ6IQ20 393 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 RANBP10Q6VN20 620 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 FZD3Q9NPG1 666 aa24.54■■□□□ 1.52
VEGFA-209ENST00000425836 SDK1Q7Z5N4 2213 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 A0A1B0GTW7 788 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 GOLGA6CA6NDK9 693 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 GOLGA6BA6NDN3 693 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 PRAMEF26H0Y7S4 382 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 RAD51BO15315 384 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 LZTS3O60299 673 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-209ENST00000425836 GOLGA6DP0CG33 693 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 GM2AP17900 193 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 HLA-DPA1P20036 260 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 HNRNPA2B1P22626 353 aaKnown RBP24.53■■□□□ 1.52
VEGFA-209ENST00000425836 RACK1P63244 317 aaKnown RBP24.53■■□□□ 1.52
VEGFA-209ENST00000425836 ARHGEF7Q14155 803 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 LRRC66Q68CR7 880 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 LENG8Q96PV6 779 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-209ENST00000425836 KLF6Q99612 283 aaPredicted RBP24.53■■□□□ 1.52
VEGFA-209ENST00000425836 MYOCQ99972 504 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 DDX47Q9H0S4 455 aaKnown RBP24.53■■□□□ 1.52
VEGFA-209ENST00000425836 SMOC1Q9H4F8 434 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 RAB6BQ9NRW1 208 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 GOLGA6AQ9NYA3 693 aa24.53■■□□□ 1.52
VEGFA-209ENST00000425836 PATE3B3GLJ2 98 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 KIF2AO00139 706 aaPredicted RBP24.52■■□□□ 1.52
VEGFA-209ENST00000425836 PIRTP0C851 137 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 AKT2P31751 481 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 PTSQ03393 145 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 SPEM2Q0P670 501 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 TRIP13Q15645 432 aaPredicted RBP24.52■■□□□ 1.52
VEGFA-209ENST00000425836 DUOXA1Q1HG43 343 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 C4orf22Q6V702 233 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 HSD11B1LQ7Z5J1 315 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 PDCD7Q8N8D1 485 aaKnown RBP24.52■■□□□ 1.52
VEGFA-209ENST00000425836 TMEM145Q8NBT3 493 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 CEP76Q8TAP6 659 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 ZNF592Q92610 1267 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 COQ10AQ96MF6 247 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 TBL1YQ9BQ87 522 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 APOL2Q9BQE5 337 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 MAGEE1Q9HCI5 957 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 AASDHPPTQ9NRN7 309 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 FEZ2Q9UHY8 353 aaPredicted RBP24.52■■□□□ 1.52
VEGFA-209ENST00000425836 CA5BQ9Y2D0 317 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 NEU2Q9Y3R4 380 aa24.52■■□□□ 1.52
VEGFA-209ENST00000425836 ANKRD36A6QL64 1941 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 GOLGA8CPA6NN73 597 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 PSMD3O43242 534 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 RECQL5O94762 991 aaPredicted RBP24.51■■□□□ 1.51
VEGFA-209ENST00000425836 CLDN7O95471 211 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 ZNF30P17039 623 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 SEMA5AQ13591 1074 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 AGERQ15109 404 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 DENND2CQ68D51 928 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 RABEPKQ7Z6M1 372 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 CENPTQ96BT3 561 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 LRRC40Q9H9A6 602 aa24.51■■□□□ 1.51
VEGFA-209ENST00000425836 C1orf232A0A0U1RR37 186 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 PRR5-ARHGAP8B1AHC4 643 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 PSMD11O00231 422 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 LRP3O75074 770 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 USP12O75317 370 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 AP2A1O95782 977 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 KRT14P02533 472 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 FGF1P05230 155 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 ZNF806P0C7X5 589 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 TGM1P22735 817 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 AFF3P51826 1226 aaKnown RBP24.5■■□□□ 1.51
VEGFA-209ENST00000425836 ACOX1Q15067 660 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 TRIM61Q5EBN2 209 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 DENND5AQ6IQ26 1287 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 SLC23A3Q6PIS1 610 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 GRK7Q8WTQ7 553 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 HINFPQ9BQA5 517 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 PARD6AQ9NPB6 346 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 SEMA4GQ9NTN9 838 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 SPO11Q9Y5K1 396 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 SPAG17Q6Q759 2223 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 A0A1W2PR77 199 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 GFRA3O60609 400 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 WNT1P04628 370 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 C1SP09871 688 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 CSNK1EP49674 416 aaKnown RBP24.5■■□□□ 1.51
VEGFA-209ENST00000425836 STC1P52823 247 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 CLDN2P57739 230 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 STAT4Q14765 748 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 WSCD2Q2TBF2 565 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 LAYNQ6UX15 382 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 LYSMD3Q7Z3D4 306 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 KLHL7Q8IXQ5 586 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 TP53I13Q8NBR0 393 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-209ENST00000425836 DENND6BQ8NEG7 585 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 C1QTNF7Q9BXJ2 289 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 ARNT2Q9HBZ2 717 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 CAPN10Q9HC96 672 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 MBNL1Q9NR56 388 aaKnown RBP24.5■■□□□ 1.51
VEGFA-209ENST00000425836 PCYOX1Q9UHG3 505 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms