RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 DLDP09622 509 aaKnown RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 LPOP22079 712 aaPredicted RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 DLG1Q12959 904 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 DGKKQ5KSL6 1271 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 HECTD2Q5U5R9 776 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 TMEM151AQ8N4L1 468 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 TTC30BQ8N4P2 665 aa26.56■■□□□ 1.84
LDB1-202ENST00000425280 RPL10LQ96L21 214 aaKnown RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 MRPS23Q9Y3D9 190 aaKnown RBP26.56■■□□□ 1.84
LDB1-202ENST00000425280 ATG2AQ2TAZ0 1938 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 A0A087X1B8 175 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 CXorf51AA0A1B0GTR3 108 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 MYO1CO00159 1063 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 HGSO14964 777 aaPredicted RBP26.55■■□□□ 1.84
LDB1-202ENST00000425280 PGLSO95336 258 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 APOA4P06727 396 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 TCF3P15923 654 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 PBX2P40425 430 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 STK19P49842 368 aaPredicted RBP26.55■■□□□ 1.84
LDB1-202ENST00000425280 GALNTL6Q49A17 601 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 ARMC12Q5T9G4 340 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 C12orf76Q8N812 135 aaPredicted RBP26.55■■□□□ 1.84
LDB1-202ENST00000425280 ITFG1Q8TB96 612 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 MYO19Q96H55 970 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 GPR78Q96P69 363 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 TNKS2Q9H2K2 1166 aa26.55■■□□□ 1.84
LDB1-202ENST00000425280 CPSF2Q9P2I0 782 aaKnown RBP26.55■■□□□ 1.84
LDB1-202ENST00000425280 ITM2AO43736 263 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 RALBP11234 206 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 SRCP12931 536 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 OGNP20774 298 aaKnown RBP26.54■■□□□ 1.84
LDB1-202ENST00000425280 MAGEA10P43363 369 aaPredicted RBP26.54■■□□□ 1.84
LDB1-202ENST00000425280 NXNL1Q96CM4 212 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 PIDD1Q9HB75 910 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 POLR3BQ9NW08 1133 aaPredicted RBP26.54■■□□□ 1.84
LDB1-202ENST00000425280 WNT6Q9Y6F9 365 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 A0A0G2JND7 137 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.54■■□□□ 1.84
LDB1-202ENST00000425280 KLHL2O95198 593 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 PIGNO95427 931 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 SBK3P0C264 359 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 PRSS56P0CW18 603 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 GKP32189 559 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 GLRBP48167 497 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 EPHB1P54762 984 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 CCDC15Q0P6D6 951 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 ITGA9Q13797 1035 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 ELMSAN1Q6PJG2 1045 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 AFTPHQ6ULP2 937 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 CRLF3Q8IUI8 442 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 OR6Y1Q8NGX8 325 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 PIH1D2Q8WWB5 315 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 SMG7Q92540 1137 aaKnown RBP26.54■■□□□ 1.84
LDB1-202ENST00000425280 ACTR5Q9H9F9 607 aaPredicted RBP26.54■■□□□ 1.84
LDB1-202ENST00000425280 HACD3Q9P035 362 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 CRYL1Q9Y2S2 319 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 VWA7Q9Y334 891 aa26.54■■□□□ 1.84
LDB1-202ENST00000425280 TK2O00142 265 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 TRAFD1O14545 582 aaPredicted RBP26.53■■□□□ 1.84
LDB1-202ENST00000425280 LYPLA1O75608 230 aaPredicted RBP26.53■■□□□ 1.84
LDB1-202ENST00000425280 IGSF6O95976 241 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 TYRP14679 529 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 GRK2P25098 689 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 MAPK8P45983 427 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 SCTRP47872 440 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 GRIA4P48058 902 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 SLC1A6P48664 564 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 LY6G5CQ5SRR4 150 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 LRRC8EQ6NSJ5 796 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 SDCCAG8Q86SQ7 713 aaPredicted RBP26.53■■□□□ 1.84
LDB1-202ENST00000425280 SPATA6LQ8N4H0 392 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 GBP7Q8N8V2 638 aaPredicted RBP26.53■■□□□ 1.84
LDB1-202ENST00000425280 RDH11Q8TC12 318 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 TSPAN17Q96FV3 270 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 SCYL1Q96KG9 808 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 TLE6Q9H808 572 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 MID2Q9UJV3 735 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 SLC12A4Q9UP95 1085 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 HS3ST2Q9Y278 367 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 LIG3P49916 1009 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 STC1P52823 247 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 BCL2L1Q07817 233 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 TYSND1Q2T9J0 566 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 SPNS2Q8IVW8 549 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 ADGRG2Q8IZP9 1017 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 FSTL5Q8N475 847 aaPredicted RBP26.53■■□□□ 1.84
LDB1-202ENST00000425280 TMEM120AQ9BXJ8 343 aa26.53■■□□□ 1.84
LDB1-202ENST00000425280 A0A0U1RQS6 177 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.52■■□□□ 1.84
LDB1-202ENST00000425280 HTRA2O43464 458 aaPredicted RBP26.52■■□□□ 1.84
LDB1-202ENST00000425280 DCTN3O75935 186 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 MYL2P10916 166 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 PABPC1P11940 636 aaKnown RBP26.52■■□□□ 1.84
LDB1-202ENST00000425280 CTPS1P17812 591 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 ARFIP2P53365 341 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 CDKN2DP55273 166 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 ACTN3Q08043 901 aaPredicted RBP26.52■■□□□ 1.84
LDB1-202ENST00000425280 ILF2Q12905 390 aaKnown RBP26.52■■□□□ 1.84
LDB1-202ENST00000425280 TSNAXIP1Q2TAA8 658 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 ZNF549Q6P9A3 640 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms