RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PABPC1LQ4VXU2 614 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FASTKD1Q53R41 847 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 C19orf54Q5BKX5 351 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 MDH1BQ5I0G3 518 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF569Q5MCW4 686 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SPDYCQ5MJ68 293 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 MFSD14BQ5SR56 506 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 AP1ARQ63HQ0 302 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FCRLBQ6BAA4 426 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FCRL6Q6DN72 434 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 METAP1DQ6UB28 335 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ZDHHC24Q6UX98 284 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 B3GNT6Q6ZMB0 384 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 Q6ZPA2 131 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 Q6ZVL8 140 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 KCTD9Q7L273 389 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ATG9AQ7Z3C6 839 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 XYLT1Q86Y38 959 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 DENND6AQ8IWF6 608 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 CLYBLQ8N0X4 340 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SYNE4Q8N205 404 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 BBS5Q8N3I7 341 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SFRP1Q8N474 314 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 NIPA2Q8N8Q9 360 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 OR5M3Q8NGP4 307 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ST7LQ8TDW4 575 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ABHD5Q8WTS1 349 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SNX33Q8WV41 574 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TEKT4Q8WW24 435 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 IP6K1Q92551 441 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 LENG9Q96B70 501 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 RAD9AQ99638 391 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 PKP2Q99959 881 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TUBA1CQ9BQE3 449 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 PIMREGQ9BSJ6 248 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 STRA6Q9BX79 667 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SIK2Q9H0K1 926 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 THAP2Q9H0W7 228 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TTYH1Q9H313 450 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TFB2MQ9H5Q4 396 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 WDR26Q9H7D7 661 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 COQ10BQ9H8M1 238 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FBRSL1Q9HCM7 1045 aaKnown RBP3.77□□□□□ -1.81
SF3B1-205ENST00000424674 FAM114A2Q9NRY5 505 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TMEM184CQ9NVA4 438 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TMEM51Q9NW97 253 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 TMOD3Q9NYL9 352 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SH3BP4Q9P0V3 963 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ANKMY1Q9P2S6 941 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SPASTQ9UBP0 616 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 CLEC4AQ9UMR7 237 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 STX8Q9UNK0 236 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 SLC8A2Q9UPR5 921 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 HPSEQ9Y251 543 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 DLGAP4Q9Y2H0 992 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 NEU2Q9Y3R4 380 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 DMRT1Q9Y5R6 373 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 LIPGQ9Y5X9 500 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 ACTL7AQ9Y615 435 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 U3KQV3 271 aa3.77□□□□□ -1.81
SF3B1-205ENST00000424674 KIF16BQ96L93 1317 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 A0A087WV48 116 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 A0A1B0GWJ7 208 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 A0A1W2PR48 441 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SLC38A8A6NNN8 435 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 GRXCR1A8MXD5 290 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 KDM4EB2RXH2 506 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 EIF3CLB5ME19 914 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 H0YIN7 160 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SLC30A4O14863 429 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 FOXN1O15353 648 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ZSCAN9O15535 394 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 DHHO43323 396 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 AVILO75366 819 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ERLIN1O75477 346 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 DNAJB5O75953 348 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RECQL4O94761 1208 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 KCNK5O95279 499 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 PDGFBP01127 241 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 KRT6BP04259 564 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ZFYP08048 801 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CYC1P08574 325 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CYP21A2P08686 494 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 UBTFL6P0CB48 400 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 DLATP10515 647 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC130P13994 396 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CD19P15391 556 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 EPORP19235 508 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 GPTP24298 496 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RPA1P27694 616 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CHRNA3P32297 505 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 MC5RP33032 325 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 KRT6CP48668 564 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 PNLIPRP2P54317 469 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NME5P56597 212 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NANOS3P60323 173 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ST8SIA6P61647 398 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ACY1Q03154 408 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms