RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 NUDT8Q8WV74 236 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 PATE1Q8WXA2 126 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TRIM62Q9BVG3 475 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 LRRC27Q9C0I9 530 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SIK2Q9H0K1 926 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 MCCC2Q9HCC0 563 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 FGF22Q9HCT0 170 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 LHX9Q9NQ69 397 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 PLA2G2EQ9NZK7 142 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 SH3BGRL2Q9UJC5 107 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 FCF1Q9Y324 198 aaKnown RBP6.34□□□□□ -1.39
SDCBP-203ENST00000424270 PCDHGA6Q9Y5G7 932 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 UNC13CQ8NB66 2214 aa6.34□□□□□ -1.39
SDCBP-203ENST00000424270 TRPM6Q9BX84 2022 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 AKAP9Q99996 3911 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM202A6NGA9 273 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 KIAA1324LA8MWY0 1029 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 M0QYV0 167 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 PDE2AO00408 941 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 CCL21O00585 134 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 PPM1DO15297 605 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 SART1O43290 800 aaKnown RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 FBXO21O94952 628 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 RECKO95980 971 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 EDN3P14138 238 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 AK4P27144 223 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 PTPN4P29074 926 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ADSLP30566 484 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 CCR1P32246 355 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 GGCXP38435 758 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 GCLMP48507 274 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 SEPHS1P49903 392 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 RAD23BP54727 409 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 CDH4P55283 916 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 RAD51Q06609 339 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ELP6Q0PNE2 266 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 NFATC2Q13469 925 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 MTM1Q13496 603 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 AUHQ13825 339 aaKnown RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 NR1D2Q14995 579 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 LLGL1Q15334 1064 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ASIC2Q16515 512 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 WSCD2Q2TBF2 565 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 VWA5B1Q5TIE3 1220 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 KCTD16Q68DU8 428 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ERAP2Q6P179 960 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 MTFR2Q6P444 385 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 TFAP2DQ7Z6R9 452 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ZNF354CQ86Y25 554 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 GUF1Q8N442 669 aaKnown RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ZNF808Q8N4W9 903 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 DCAF4L2Q8NA75 395 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 TAS1R2Q8TE23 839 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ITLN2Q8WWU7 325 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ALG14Q96F25 216 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 SLC39A13Q96H72 371 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 TRAPPC9Q96Q05 1148 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 NCAPGQ9BPX3 1015 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 OSBPL1AQ9BXW6 950 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 GPR87Q9BY21 358 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 CEP44Q9C0F1 390 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 APOBEC3GQ9HC16 384 aaKnown RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 ATP13A1Q9HD20 1204 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 CGNQ9P2M7 1197 aaKnown RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 AJAP1Q9UKB5 411 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-203ENST00000424270 SNX7Q9UNH6 387 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 FRMD4BQ9Y2L6 1034 aa6.33□□□□□ -1.4
SDCBP-203ENST00000424270 A0A0D9SEW6 157 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 PRSS38A1L453 326 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 FAM221AA4D161 298 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 GOLGA6CA6NDK9 693 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 GOLGA6BA6NDN3 693 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 TRUB2O95900 331 aaKnown RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 GOLGA6DP0CG33 693 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 KRT13P13646 458 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 ITIH2P19823 946 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 OR1E1P30953 314 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 HOXD13P35453 343 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 ACTR1BP42025 376 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 SERPINH1P50454 418 aaKnown RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 IRAK1P51617 712 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 CASP6P55212 293 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 KIAA1024LP59773 190 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 ACTR1AP61163 376 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 YWHAEP62258 255 aaKnown RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 SNRPD1P62314 119 aaKnown RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 CDC16Q13042 620 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 NME3Q13232 169 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 IL10RAQ13651 578 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 EFHC1Q5JVL4 640 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 CYB5D1Q6P9G0 228 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 FAM199XQ6PEV8 388 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 WDR74Q6RFH5 385 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 FAM180AQ6UWF9 173 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 LRRC31Q6UY01 552 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 GDPD4Q6W3E5 623 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 RPTNQ6XPR3 784 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 THSD4Q6ZMP0 1018 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 ZNF765Q7L2R6 523 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 ARHGAP22Q7Z5H3 698 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms