RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 SPOPO43791 374 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 HEXIM1O94992 359 aaKnown RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 NDUFA10O95299 355 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 PRLP01236 227 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CELA2BP08218 269 aaPredicted RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 MMP2P08253 660 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 C1SP09871 688 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 ALPIP09923 528 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CTPS1P17812 591 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 MX2P20592 715 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CYLC1P35663 651 aaPredicted RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CDKN2BP42772 138 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 NOP2P46087 812 aaKnown RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 PEX5P50542 639 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 ADCY2Q08462 1091 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 MTM1Q13496 603 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 C1orf61Q13536 156 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CAMK2BQ13554 666 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 NFATC4Q14934 902 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 ARMC12Q5T9G4 340 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 TSPAN33Q86UF1 283 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 RFX6Q8HWS3 928 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 TMEM139Q8IV31 216 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CCNYQ8ND76 341 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 LMX1AQ8TE12 382 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 SCRN2Q96FV2 425 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 APOLD1Q96LR9 279 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 LRRC61Q9BV99 259 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 TDRD1Q9BXT4 1180 aaKnown RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 DDX56Q9NY93 547 aaKnown RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 APOBEC3BQ9UH17 382 aaKnown RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 AMACRQ9UHK6 382 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 HEY1Q9Y5J3 304 aa17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 EPN1Q9Y6I3 576 aaPredicted RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 COL27A1Q8IZC6 1860 aaPredicted RBP17.88■□□□□ 0.45
SBDSP1-202ENST00000423945 CFAP47Q6ZTR5 3102 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 H3BM21 787 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 APOL1O14791 398 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 JCHAINP01591 159 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 TRIM23P36406 574 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 IFI35P80217 286 aaPredicted RBP17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 ITKQ08881 620 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 ACOX1Q15067 660 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 ALG11Q2TAA5 492 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 B4GALNT4Q76KP1 1039 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 HSD11B1LQ7Z5J1 315 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 TMTC1Q8IUR5 882 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 FAM181AQ8N9Y4 354 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 TPCN2Q8NHX9 752 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 BTN2A2Q8WVV5 523 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 TSACCQ96A04 125 aaPredicted RBP17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 DUSP10Q9Y6W6 482 aa17.87■□□□□ 0.45
SBDSP1-202ENST00000423945 ZFHX4Q86UP3 3567 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 NEMP2A6NFY4 417 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 PSTPIP1O43586 416 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 CKMT1AP12532 417 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 KRT10P13645 584 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 HNF1BP35680 557 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 DYNLT1P63172 113 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 PPARDQ03181 441 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 LLGL1Q15334 1064 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 SPA17Q15506 151 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 DEFB133Q30KQ1 61 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 PRRT3Q5FWE3 981 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 C11orf63Q6NUN7 778 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 ESRP1Q6NXG1 681 aaKnown RBP17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 SPOCD1Q6ZMY3 1216 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 RFLNAQ6ZTI6 216 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 GALNT15Q8N3T1 639 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 KRT35Q92764 455 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 DTD2Q96FN9 168 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 TBATAQ96M53 351 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 LGR4Q9BXB1 951 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 CEP41Q9BYV8 373 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 SAE1Q9UBE0 346 aaPredicted RBP17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 SPASTQ9UBP0 616 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 ZMIZ1Q9ULJ6 1067 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 CHKBQ9Y259 395 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 TTLL3Q9Y4R7 772 aa17.86■□□□□ 0.45
SBDSP1-202ENST00000423945 A0A0J9YYE9 177 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 TMEM202A6NGA9 273 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 TAF4O00268 1085 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 TRBC1P01850 177 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 ALPPL2P10696 532 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 CYP2A6P11509 494 aaPredicted RBP17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 PECAM1P16284 738 aaPredicted RBP17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 TSHRP16473 764 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 CES1P23141 567 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 ETV3P41162 512 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 HK3P52790 923 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 KIAA1024LP59773 190 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 SKOR1P84550 965 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 ILKQ13418 452 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 FAXCQ5TGI0 409 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 DENND2CQ68D51 928 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 PNCKQ6P2M8 343 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 CRTC1Q6UUV9 634 aa17.85■□□□□ 0.45
SBDSP1-202ENST00000423945 ENPP7Q6UWV6 458 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms