RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LSM8O95777 96 aaKnown RBP16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 CCNB1P14635 433 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 TSPAN7P41732 249 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 MAZP56270 477 aaKnown RBP16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 C15orf59Q2T9L4 293 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 DPY19L2P1Q6NXN4 242 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 STRADAQ7RTN6 431 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 ZSWIM9Q86XI8 627 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 RTL3Q8N8U3 475 aaKnown RBP16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 MSANTD4Q8NCY6 345 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 ZDHHC1Q8WTX9 485 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 CENPIQ92674 756 aaPredicted RBP16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 ART4Q93070 314 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 ABHD17AQ96GS6 310 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 DPYSL5Q9BPU6 564 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 LRRC4CQ9HCJ2 640 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 PILRAQ9UKJ1 303 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 PLAAQ9Y263 795 aa16.79■□□□□ 0.28
CHCHD3-202ENST00000423635 PRSS38A1L453 326 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 PDE2AO00408 941 aaPredicted RBP16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 CSTF2P33240 577 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 RALGDSQ12967 914 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 AFMIDQ63HM1 303 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 PNCKQ6P2M8 343 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 LIPIQ6XZB0 460 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 ZNF354CQ86Y25 554 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 CREBRFQ8IUR6 639 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 RXFP2Q8WXD0 754 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 EXOC2Q96KP1 924 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 TUBGCP5Q96RT8 1024 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 EFHD1Q9BUP0 239 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 METTL5Q9NRN9 209 aaKnown RBP16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 SLC39A1Q9NY26 324 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 MYO9AB2RTY4 2548 aa16.78■□□□□ 0.28
CHCHD3-202ENST00000423635 WASH4PA8MWX3 477 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 RASA4BC9J798 803 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 BIN1O00499 593 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 RASA4O43374 803 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 ECEL1O95672 775 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 THRAP10827 490 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 GM2AP17900 193 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 MAP4P27816 1152 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 SDC4P31431 198 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 PTPN9P43378 593 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 CSNK1DP48730 415 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 RAB15P59190 212 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 CDO1Q16878 200 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 PARP15Q460N3 678 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 CRTC2Q53ET0 693 aaPredicted RBP16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 DCAF12Q5T6F0 453 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 CAMK1DQ8IU85 385 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 CCDC185Q8N715 623 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 APOBEC4Q8WW27 367 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 CPA5Q8WXQ8 436 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 NTAN1Q96AB6 310 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 GSDMCQ9BYG8 508 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 WDR26Q9H7D7 661 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 TRNAU1APQ9NX07 287 aaKnown RBP16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 OCIAD1Q9NX40 245 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 TAAR2Q9P1P5 351 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 PDP2Q9P2J9 529 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.28
CHCHD3-202ENST00000423635 ANKRD36A6QL64 1941 aa16.77■□□□□ 0.27
CHCHD3-202ENST00000423635 IGHV1OR21-1A0A087WYE8 117 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 FAM170AA1A519 330 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 C2CD4BA6NLJ0 364 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 PPM1DO15297 605 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 FUCA1P04066 466 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 PRKCGP05129 697 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 HDAC4P56524 1084 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 NOMO3P69849 1222 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 KLRB1Q12918 225 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 CFAP58Q5T655 872 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 TAF3Q5VWG9 929 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 TMEM71Q6P5X7 295 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 NLGN4XQ8N0W4 816 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 UMODL1-AS1Q8N2C9 162 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 PELI3Q8N2H9 469 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 BMPERQ8N8U9 685 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 NLGN4YQ8NFZ3 816 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 ECHDC3Q96DC8 303 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 TEFMQ96QE5 360 aaKnown RBP16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 GPN2Q9H9Y4 310 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 PDFQ9HBH1 243 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 UBA2Q9UBT2 640 aaPredicted RBP16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 MOSPD1Q9UJG1 213 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 ICE1Q9Y2F5 2266 aa16.76■□□□□ 0.27
CHCHD3-202ENST00000423635 LOC101059948A0A1B0GTJ6 334 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 DUX1O43812 170 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 CEACAM5P06731 702 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 EPHB2P29323 1055 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 CDC20Q12834 499 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 ILF3Q12906 894 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 LACTB2Q53H82 288 aaPredicted RBP16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 NKAIN2Q5VXU1 208 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 DPPA4Q7L190 304 aa16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 NOP9Q86U38 636 aaKnown RBP16.75■□□□□ 0.27
CHCHD3-202ENST00000423635 ATCAYQ86WG3 371 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms