RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 EME2A4GXA9 379 aaPredicted RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 CFAP69A5D8W1 941 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 YY2O15391 372 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 HTRA2O43464 458 aaPredicted RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 BRINP1O60477 761 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 SOCS5O75159 536 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 CSO75390 466 aaKnown RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 PROSCO94903 275 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 MAP3K6O95382 1288 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 CPP00450 1065 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 ANXA6P08133 673 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 TGM2P21980 687 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 CYLC1P35663 651 aaPredicted RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 HSPA9P38646 679 aaKnown RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 MMP13P45452 471 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 TAS2R40P59535 323 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 DPYSL3Q14195 570 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 NCBP2-AS2Q69YL0 99 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 TMEM139Q8IV31 216 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 PCDH19Q8TAB3 1148 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 PDCD6IPQ8WUM4 868 aaKnown RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 FUBP1Q96AE4 644 aaKnown RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 DEPDC7Q96QD5 511 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 RCOR3Q9P2K3 495 aaPredicted RBP15.24■□□□□ 0.03
USB1-202ENST00000423271 KLQ9UEF7 1012 aa15.24■□□□□ 0.03
USB1-202ENST00000423271 A0A087WV48 116 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 TMEM202A6NGA9 273 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 TMEM110-MUSTN1A8MSY1 372 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 RASGRP1O95267 797 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 LCA5LO95447 670 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 HOXB3P14651 431 aaPredicted RBP15.23■□□□□ 0.03
USB1-202ENST00000423271 HTR1BP28222 390 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 SRP54P61011 504 aaKnown RBP15.23■□□□□ 0.03
USB1-202ENST00000423271 POLR2LP62875 67 aaKnown RBP15.23■□□□□ 0.03
USB1-202ENST00000423271 ACOX1Q15067 660 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 PTPRRQ15256 657 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 CNGA3Q16281 694 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 HADHQ16836 314 aaKnown RBP15.23■□□□□ 0.03
USB1-202ENST00000423271 RAD9BQ6WBX8 426 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 PDZD3Q86UT5 571 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 BBS5Q8N3I7 341 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 FSTL5Q8N475 847 aaPredicted RBP15.23■□□□□ 0.03
USB1-202ENST00000423271 KYQ8NBH2 561 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 OR1E3Q8WZA6 343 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 SPOCK2Q92563 424 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 WDR92Q96MX6 357 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 BAG1Q99933 345 aaPredicted RBP15.23■□□□□ 0.03
USB1-202ENST00000423271 ABCG4Q9H172 646 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 FGF22Q9HCT0 170 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 NT5MQ9NPB1 228 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 NCKIPSDQ9NZQ3 722 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 PTPRQQ9UMZ3 2332 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 IGSF10Q6WRI0 2623 aa15.23■□□□□ 0.03
USB1-202ENST00000423271 NDUFA10O95299 355 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 MPOP05164 745 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 CTSEP14091 401 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 LHCGRP22888 699 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 VIPR1P32241 457 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 MAGEA1P43355 309 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 BLKP51451 505 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 KIAA1024LP59773 190 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 GALNT2Q10471 571 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
USB1-202ENST00000423271 ELOCQ15369 112 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 MARC1Q5VT66 337 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 DENND2CQ68D51 928 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 LRRN4Q8WUT4 740 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 NSMCE1Q8WV22 266 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 COQ10AQ96MF6 247 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 SMIM14Q96QK8 99 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 LGR4Q9BXB1 951 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 MRPL40Q9NQ50 206 aaKnown RBP15.22■□□□□ 0.03
USB1-202ENST00000423271 SIRPGQ9P1W8 387 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 UVRAGQ9P2Y5 699 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 DOLKQ9UPQ8 538 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 EPN1Q9Y6I3 576 aaPredicted RBP15.22■□□□□ 0.03
USB1-202ENST00000423271 KIF26BQ2KJY2 2108 aa15.22■□□□□ 0.03
USB1-202ENST00000423271 A0A0U1RQS6 177 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 NPIPB15A6NHN6 443 aaPredicted RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 CACNB4O00305 520 aaPredicted RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 USP12O75317 370 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 HEXIM1O94992 359 aaKnown RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 PGLSO95336 258 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ALPIP09923 528 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ITPKBP27987 946 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 EIF2S3P41091 472 aaKnown RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 GARSP41250 739 aaKnown RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 RPIAP49247 311 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 GSDMDP57764 484 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 IHHQ14623 411 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 SPA17Q15506 151 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ANKRD20A8PQ5CZ79 823 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ESRP1Q6NXG1 681 aaKnown RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 HSD11B1LQ7Z5J1 315 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 TSPAN33Q86UF1 283 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 TEX26Q8N6G2 289 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 PQLC3Q8N755 202 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ARL10Q8N8L6 244 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 KCTD6Q8NC69 237 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms