RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 GOLGA6AQ9NYA3 693 aa9.32□□□□□ -0.92
NUP50-206ENST00000422489 PHTF1Q9UMS5 762 aa9.32□□□□□ -0.92
NUP50-206ENST00000422489 TTLL3Q9Y4R7 772 aa9.32□□□□□ -0.92
NUP50-206ENST00000422489 TMEM131Q92545 1883 aa9.32□□□□□ -0.92
NUP50-206ENST00000422489 A0A087WV48 116 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 PDE2AO00408 941 aaPredicted RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 HTRA2O43464 458 aaPredicted RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 SOCS5O75159 536 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 KRT7P08729 469 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 KRT10P13645 584 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 KELP23276 732 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 NFKBIAP25963 317 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 HNRNPH3P31942 346 aaKnown RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 ABCG1P45844 678 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 EPHB1P54762 984 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 TAS2R40P59535 323 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 GABREP78334 506 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 CCDC173Q0VFZ6 552 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 ARHGEF7Q14155 803 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 DPYSL3Q14195 570 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 PDK2Q15119 407 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 SLC18A3Q16572 532 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 ODF2Q5BJF6 829 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 KCTD16Q68DU8 428 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 RBM44Q6ZP01 1051 aaKnown RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 NDUFAF2Q8N183 169 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 Q8N9G6 341 aaPredicted RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 FAM46DQ8NEK8 389 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 TPCN2Q8NHX9 752 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 NUS1Q96E22 293 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 CRELD1Q96HD1 420 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 NAF1Q96HR8 494 aaKnown RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 TBATAQ96M53 351 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 CCDC42Q96M95 316 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 CHP1Q99653 195 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 CCDC3Q9BQI4 270 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 MGME1Q9BQP7 344 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 BOCQ9BWV1 1114 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 LGR4Q9BXB1 951 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 RCOR3Q9P2K3 495 aaPredicted RBP9.31□□□□□ -0.92
NUP50-206ENST00000422489 UVRAGQ9P2Y5 699 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 RAI2Q9Y5P3 530 aa9.31□□□□□ -0.92
NUP50-206ENST00000422489 CACNA1BQ00975 2339 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 A0A0U1RQS6 177 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 AGRPO00253 132 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 MATN3O15232 486 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 CASC3O15234 703 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 MFSD11O43934 449 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 HEXIM1O94992 359 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 PGLSO95336 258 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 PDHA1P08559 390 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 TNNT1P13805 278 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 HOXB3P14651 431 aaPredicted RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 GM2AP17900 193 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 CR2P20023 1033 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 KDELR1P24390 212 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 RBMS1P29558 406 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 ETV3P41162 512 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 GARSP41250 739 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 ARSEP51690 589 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 KIAA1024LP59773 190 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 TRIM14Q14142 442 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 PAFAH1B3Q15102 231 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 CNGA3Q16281 694 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 IFI16Q16666 785 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 ISXQ2M1V0 245 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 C3orf38Q5JPI3 329 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 NCBP2-AS2Q69YL0 99 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 TIGD7Q6NT04 549 aaPredicted RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 LVRNQ6Q4G3 990 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 USP45Q70EL2 814 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 LRRC49Q8IUZ0 686 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 LSMEM2Q8N112 164 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 PELI3Q8N2H9 469 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 TEX26Q8N6G2 289 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 ARL10Q8N8L6 244 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 SLC35G2Q8TBE7 412 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 NAT6Q93015 286 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 SCRN2Q96FV2 425 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 PDXPQ96GD0 296 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 ATXN7L3BQ96GX2 97 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 COQ10AQ96MF6 247 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 SMIM14Q96QK8 99 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 MAK16Q9BXY0 300 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 POLR1EQ9GZS1 481 aaKnown RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 TMEM168Q9H0V1 697 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 WDR26Q9H7D7 661 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 POLR1BQ9H9Y6 1135 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 PHPT1Q9NRX4 125 aaPredicted RBP9.3□□□□□ -0.92
NUP50-206ENST00000422489 SPTLC3Q9NUV7 552 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 CD84Q9UIB8 345 aa9.3□□□□□ -0.92
NUP50-206ENST00000422489 IGF2RP11717 2491 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 COL5A1P20908 1838 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 SSU72P8A0A1W2PR75 194 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 NPIPB15A6NHN6 443 aaPredicted RBP9.29□□□□□ -0.92
NUP50-206ENST00000422489 JCHAINP01591 159 aa9.29□□□□□ -0.92
NUP50-206ENST00000422489 RPLP0P05388 317 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms