RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 HDAC11Q96DB2 347 aa21.99■■□□□ 1.11
TRAF4-204ENST00000422344 BBC3Q96PG8 261 aaPredicted RBP21.99■■□□□ 1.11
TRAF4-204ENST00000422344 DUSP23Q9BVJ7 150 aa21.99■■□□□ 1.11
TRAF4-204ENST00000422344 NLGN3Q9NZ94 848 aa21.99■■□□□ 1.11
TRAF4-204ENST00000422344 B4GALT6Q9UBX8 382 aa21.99■■□□□ 1.11
TRAF4-204ENST00000422344 RECQL5O94762 991 aaPredicted RBP21.98■■□□□ 1.11
TRAF4-204ENST00000422344 PGLSO95336 258 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 CA4P22748 312 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 VIPR1P32241 457 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 ACADVLP49748 655 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 PEX5P50542 639 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 EIF2B5Q13144 721 aaKnown RBP21.98■■□□□ 1.11
TRAF4-204ENST00000422344 MTM1Q13496 603 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 INPP5AQ14642 412 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 SMAD1Q15797 465 aaKnown RBP21.98■■□□□ 1.11
TRAF4-204ENST00000422344 USP45Q70EL2 814 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 PDCD7Q8N8D1 485 aaKnown RBP21.98■■□□□ 1.11
TRAF4-204ENST00000422344 ATL2Q8NHH9 583 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 LMX1AQ8TE12 382 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 SLC13A1Q9BZW2 595 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 EVA1BQ9NVM1 165 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 SPASTQ9UBP0 616 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 APOBEC3BQ9UH17 382 aaKnown RBP21.98■■□□□ 1.11
TRAF4-204ENST00000422344 RAI2Q9Y5P3 530 aa21.98■■□□□ 1.11
TRAF4-204ENST00000422344 SOWAHDA6NJG2 315 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 C3orf70A6NLC5 250 aaPredicted RBP21.97■■□□□ 1.11
TRAF4-204ENST00000422344 SCAMP1O15126 338 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 AQP9O43315 295 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 PSTPIP1O43586 416 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 PPARDQ03181 441 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 SLC10A2Q12908 348 aaPredicted RBP21.97■■□□□ 1.11
TRAF4-204ENST00000422344 ILKQ13418 452 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 PROX2Q3B8N5 592 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 FAXCQ5TGI0 409 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 SLC9A4Q6AI14 798 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 PHACTR4Q8IZ21 702 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 PLD5Q8N7P1 536 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 LRRN4Q8WUT4 740 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 APOOQ9BUR5 198 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 CAAP1Q9H8G2 361 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 KLF15Q9UIH9 416 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 OR1A2Q9Y585 309 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 ALG6Q9Y672 507 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 EPN1Q9Y6I3 576 aaPredicted RBP21.97■■□□□ 1.11
TRAF4-204ENST00000422344 CSNK1G3Q9Y6M4 447 aa21.97■■□□□ 1.11
TRAF4-204ENST00000422344 A0A0A6YYK5 440 aaPredicted RBP21.96■■□□□ 1.11
TRAF4-204ENST00000422344 EIF4E1BA6NMX2 242 aaKnown RBP21.96■■□□□ 1.11
TRAF4-204ENST00000422344 PPP1R12AO14974 1030 aaPredicted RBP21.96■■□□□ 1.11
TRAF4-204ENST00000422344 NDUFA10O95299 355 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 BLKP51451 505 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 EPHB1P54762 984 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 DYNLT1P63172 113 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 DSC2Q02487 901 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 PPIDQ08752 370 aaKnown RBP21.96■■□□□ 1.11
TRAF4-204ENST00000422344 AP1B1Q10567 949 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 ARHGEF7Q14155 803 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 NFATC4Q14934 902 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 PDK1Q15118 436 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 DENND2CQ68D51 928 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 RBFAQ8N0V3 343 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 TPCN2Q8NHX9 752 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 CRELD1Q96HD1 420 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 LGMNQ99538 433 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.96■■□□□ 1.11
TRAF4-204ENST00000422344 LRRK1Q38SD2 2015 aa21.96■■□□□ 1.11
TRAF4-204ENST00000422344 K7ESM1 405 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 KCNK1O00180 336 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 CACNB4O00305 520 aaPredicted RBP21.95■■□□□ 1.1
TRAF4-204ENST00000422344 HLA-DQB2P05538 268 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 ACP1P24666 158 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 TFDP2Q14188 446 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 CNGA3Q16281 694 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 PRRT3Q5FWE3 981 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 ALG1LQ6GMV1 187 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 C11orf63Q6NUN7 778 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 ENPP7Q6UWV6 458 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 MFSD7Q6UXD7 560 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 NUS1Q96E22 293 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 SCRN2Q96FV2 425 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 IL12RB2Q99665 862 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 KCTD5Q9NXV2 234 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 TFR2Q9UP52 801 aa21.95■■□□□ 1.1
TRAF4-204ENST00000422344 TDRD6O60522 2096 aaKnown RBP21.94■■□□□ 1.1
TRAF4-204ENST00000422344 A0A087WV48 116 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 HEXIM1O94992 359 aaKnown RBP21.94■■□□□ 1.1
TRAF4-204ENST00000422344 RASGRP1O95267 797 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 JCHAINP01591 159 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 CTPS1P17812 591 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 HNF1BP35680 557 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 DUSP3P51452 185 aaPredicted RBP21.94■■□□□ 1.1
TRAF4-204ENST00000422344 NAP1L1P55209 391 aaKnown RBP21.94■■□□□ 1.1
TRAF4-204ENST00000422344 ZCCHC8Q6NZY4 707 aaKnown RBP21.94■■□□□ 1.1
TRAF4-204ENST00000422344 DAAM2Q86T65 1068 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 TMPRSS12Q86WS5 348 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 HID1Q8IV36 788 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 PLA2G15Q8NCC3 412 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 CALR3Q96L12 384 aaKnown RBP21.94■■□□□ 1.1
TRAF4-204ENST00000422344 APOLD1Q96LR9 279 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 TBATAQ96M53 351 aa21.94■■□□□ 1.1
TRAF4-204ENST00000422344 WDR92Q96MX6 357 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms