RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 MTM1Q13496 603 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 B4GALNT4Q76KP1 1039 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 NDUFAF2Q8N183 169 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 SLC25A45Q8N413 288 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 TFB1MQ8WVM0 346 aaKnown RBP26.47■■□□□ 1.83
CDK9-202ENST00000421939 P3H4Q92791 437 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 CNDP2Q96KP4 475 aaKnown RBP26.47■■□□□ 1.83
CDK9-202ENST00000421939 CHKBQ9Y259 395 aa26.47■■□□□ 1.83
CDK9-202ENST00000421939 TOP3BO95985 862 aaKnown RBP26.46■■□□□ 1.83
CDK9-202ENST00000421939 MMP2P08253 660 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 PEX5P50542 639 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 EPHB1P54762 984 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 INPP5AQ14642 412 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 BBS12Q6ZW61 710 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 SLCO6A1Q86UG4 719 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 NT5DC3Q86UY8 548 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 PNPLA1Q8N8W4 532 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 HAUS1Q96CS2 278 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 COQ10AQ96MF6 247 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 AGAP3Q96P47 875 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 HEMGNQ9BXL5 484 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 KLF15Q9UIH9 416 aa26.46■■□□□ 1.83
CDK9-202ENST00000421939 ARID1BQ8NFD5 2236 aaPredicted RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 A0A0J9YYE9 177 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 GOLGA8CPA6NN73 597 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 PSMD11O00231 422 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 ENC1O14682 589 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 HYAL3O43820 417 aaPredicted RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 LDOC1O95751 146 aaPredicted RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 TRBC1P01850 177 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 ALPIP09923 528 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 JUNDP17535 347 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 RWDD2BP57060 319 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 RPL26P61254 145 aaKnown RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 SKOR1P84550 965 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 ARHGEF7Q14155 803 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 NFATC4Q14934 902 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 PTPRRQ15256 657 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 RAB44Q7Z6P3 723 aaPredicted RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 TSPAN33Q86UF1 283 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 SYCE1Q8N0S2 351 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 ZNF548Q8NEK5 533 aaPredicted RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 ADAMTS14Q8WXS8 1223 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 NUS1Q96E22 293 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 APOOQ9BUR5 198 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 PCDH9Q9HC56 1237 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 RPL26L1Q9UNX3 145 aaKnown RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 OR1A2Q9Y585 309 aa26.45■■□□□ 1.82
CDK9-202ENST00000421939 TDRD6O60522 2096 aaKnown RBP26.45■■□□□ 1.82
CDK9-202ENST00000421939 FFAR2O15552 330 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 DKK1O94907 266 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 PRLP01236 227 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 SPINK2P20155 84 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 PTPN7P35236 360 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 HNF1BP35680 557 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 FAM182AQ5T1J6 154 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 DENND2CQ68D51 928 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 PEX26Q7Z412 305 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 PLA2G15Q8NCC3 412 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 CCDC112Q8NEF3 446 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 LPCAT1Q8NF37 534 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 OR4C6Q8NH72 309 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 ALG3Q92685 438 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 DTD2Q96FN9 168 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 AMFRQ9UKV5 643 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 ADGRG1Q9Y653 693 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 ACACBO00763 2458 aa26.44■■□□□ 1.82
CDK9-202ENST00000421939 CAPN8A6NHC0 703 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 APOC4-APOC2K7ER74 178 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 TRIM38O00635 465 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 ARHGAP6O43182 974 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 MTSS1O43312 755 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 APOC2P02655 101 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 PTPN3P26045 913 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 HTR1BP28222 390 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 TEX44Q53QW1 395 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 CCDC181Q5TID7 509 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 LRRC66Q68CR7 880 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 ESRP1Q6NXG1 681 aaKnown RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 HSD11B1LQ7Z5J1 315 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 ZC3H18Q86VM9 953 aaKnown RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 PHACTR4Q8IZ21 702 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 RBFAQ8N0V3 343 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 CBARPQ8N350 705 aaPredicted RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 CHCHD4Q8N4Q1 142 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 BTN2A2Q8WVV5 523 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 IMP4Q96G21 291 aaKnown RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 QKIQ96PU8 341 aaKnown RBP eCLIP26.43■■□□□ 1.82
CDK9-202ENST00000421939 SMIM14Q96QK8 99 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 SCNM1Q9BWG6 230 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 OSBPL8Q9BZF1 889 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 SLC25A51Q9H1U9 297 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 KCTD5Q9NXV2 234 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 APOBEC3BQ9UH17 382 aaKnown RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 DNPEPQ9ULA0 475 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 PNMA8BQ9ULN7 279 aaPredicted RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 EFR3BQ9Y2G0 817 aa26.43■■□□□ 1.82
CDK9-202ENST00000421939 TPRP12270 2363 aaKnown RBP26.43■■□□□ 1.82
CDK9-202ENST00000421939 NEMP2A6NFY4 417 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 HACD1B0YJ81 288 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms