RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 IL21RQ9HBE5 538 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ANKEF1Q9NU02 776 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 UXTQ9UBK9 157 aaPredicted RBP5.17□□□□□ -1.58
SFXN1-202ENST00000421887 ADAM21Q9UKJ8 722 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 SIK3Q9Y2K2 1263 aa5.17□□□□□ -1.58
SFXN1-202ENST00000421887 NID2Q14112 1375 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 KLF18A0A0U1RQI7 1052 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 TBC1D3BA6NDS4 549 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 K7ERI5 159 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 M0QZQ0 153 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 ADAMTS3O15072 1205 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 PRPF3O43395 683 aaKnown RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 BRINP1O60477 761 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 KRT38O76015 456 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 LARGE1O95461 756 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 HOXB2P14652 356 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 GABRG2P18507 467 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 OPRD1P41143 372 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 TNFRSF4P43489 277 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 CCR10P46092 362 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 PDE6CP51160 858 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 EFNA5P52803 228 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 RCAN1P53805 252 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 ITKQ08881 620 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 MYO1EQ12965 1108 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 HDAC1Q13547 482 aaPredicted RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 KCNB1Q14721 858 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF77Q15935 545 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 NFE2Q16621 373 aaPredicted RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 TBC1D25Q3MII6 688 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 SLC39A12Q504Y0 691 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 EMC10Q5UCC4 262 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 RNF219Q5W0B1 726 aaPredicted RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 AFMIDQ63HM1 303 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 C2orf15Q8WU43 125 aaKnown RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 C18orf25Q96B23 403 aaPredicted RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 IFT74Q96LB3 600 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 MTMR9Q96QG7 549 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 SMAD5Q99717 465 aaKnown RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 NAP1L4Q99733 375 aaKnown RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 TMEM206Q9H813 350 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 RPF1Q9H9Y2 349 aaKnown RBP5.16□□□□□ -1.58
SFXN1-202ENST00000421887 ZDHHC4Q9NPG8 344 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 ANLNQ9NQW6 1124 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 VPS54Q9P1Q0 977 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 KCNG1Q9UIX4 513 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 NFE2L3Q9Y4A8 694 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 LRP12Q9Y561 859 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 PCDHGA1Q9Y5H4 931 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 MYH10P35580 1976 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 STK36Q9NRP7 1315 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 CABIN1Q9Y6J0 2220 aa5.16□□□□□ -1.58
SFXN1-202ENST00000421887 ANAPC1Q9H1A4 1944 aa5.15□□□□□ -1.58
SFXN1-202ENST00000421887 TP53BP1Q12888 1972 aaPredicted RBP5.15□□□□□ -1.58
SFXN1-202ENST00000421887 AHCTF1Q8WYP5 2266 aa5.15□□□□□ -1.58
SFXN1-202ENST00000421887 ZNF891A8MT65 544 aaPredicted RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 SLC9A3R1O14745 358 aaPredicted RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 KLK10O43240 276 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 XPOTO43592 962 aaKnown RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 SLC37A4O43826 429 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 CCNT1O60563 726 aaKnown RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 PHF2O75151 1096 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 SLITRK3O94933 977 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 VNN2O95498 520 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 CSH1P0DML2 217 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 CSH2P0DML3 217 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 ODC1P11926 461 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 MYF5P13349 255 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 KCNE1P15382 129 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 ALOX15P16050 662 aaPredicted RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 GCFC2P16383 781 aaKnown RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 ATF6P18850 670 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 HDCP19113 662 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 TYMPP19971 482 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 CD6P30203 668 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 NTSR1P30989 418 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 EIF2DP41214 584 aaKnown RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 NAMPTP43490 491 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 CCT8P50990 548 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 NEK2P51955 445 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 MANFP55145 182 aaKnown RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 RIPPLY3P57055 190 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 KDSRQ06136 332 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 SMARCB1Q12824 385 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 DHCR24Q15392 516 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 FAM153CQ494X1 144 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 HES3Q5TGS1 186 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 VWA1Q6PCB0 445 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 KIAA1324Q6UXG2 1013 aaKnown RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 ALKAL1Q6UXT8 129 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 USP49Q70CQ1 688 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 METTL23Q86XA0 190 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 CHPFQ8IZ52 775 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 LSMEM2Q8N112 164 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 THEM5Q8N1Q8 247 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 ARL14EPQ8N8R7 260 aaPredicted RBP5.15□□□□□ -1.59
SFXN1-202ENST00000421887 SPPL2BQ8TCT7 592 aa5.15□□□□□ -1.59
SFXN1-202ENST00000421887 PIGOQ8TEQ8 1089 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms