RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GOLGA8CPA6NN73 597 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 AP1G1O43747 822 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 BANF1O75531 89 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 PCDH8O95206 1070 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 MGAT1P26572 445 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 HOXA6P31267 233 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 VIPR1P32241 457 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 SUOXP51687 545 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 CCDC15Q0P6D6 951 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 MSLNQ13421 630 aaPredicted RBP15.75■□□□□ 0.11
DDX55-203ENST00000421670 SEPT6Q14141 434 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 ANGPT1Q15389 498 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 CNGA3Q16281 694 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 CCDC38Q502W7 563 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 FNBP1LQ5T0N5 605 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 GLT6D1Q7Z4J2 308 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 LYSMD1Q96S90 227 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 MAGEE1Q9HCI5 957 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 XAB2Q9HCS7 855 aaKnown RBP15.75■□□□□ 0.11
DDX55-203ENST00000421670 GDF3Q9NR23 364 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 FAM114A2Q9NRY5 505 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 SYBUQ9NX95 663 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 FBXO4Q9UKT5 387 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 ARL5AQ9Y689 179 aa15.75■□□□□ 0.11
DDX55-203ENST00000421670 TNRC6BQ9UPQ9 1833 aaKnown RBP15.75■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3DA0A087WVF3 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3IA0A087WXS9 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3EA0A087X179 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3KA0A087X1G2 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3FA6NER0 549 aaPredicted RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3LB9A6J9 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 NDC80O14777 642 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 BUD23O43709 281 aaKnown RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 CLDN7O95471 211 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 SEMA4FO95754 770 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 ELFN1P0C7U0 828 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3HP0C7X1 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 CYP2A6P11509 494 aaPredicted RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 NFKBIAP25963 317 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 CD6P30203 668 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 MAGEA3P43357 314 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 CARSP49589 748 aaKnown RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 LIG3P49916 1009 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 PPP2CBP62714 309 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 PPP2CAP67775 309 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 HLTFQ14527 1009 aaKnown RBP eCLIP15.74■□□□□ 0.11
DDX55-203ENST00000421670 HIF1AQ16665 826 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 CDKN3Q16667 212 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 ERCC6LQ2NKX8 1250 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 MSS51Q4VC12 460 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 SEL1L3Q68CR1 1132 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3GQ6DHY5 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3CQ6IPX1 549 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 TBC1D3Q8IZP1 549 aaPredicted RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 AGGF1Q8N302 714 aaeCLIP15.74■□□□□ 0.11
DDX55-203ENST00000421670 MPP5Q8N3R9 675 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 CXorf40AQ8TE69 158 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 UBXN4Q92575 508 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 SPACA7Q96KW9 195 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 GPR174Q9BXC1 333 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 C1QTNF1Q9BXJ1 281 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 SGK2Q9HBY8 427 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 ZDHHC18Q9NUE0 388 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 WSB2Q9NYS7 404 aaPredicted RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 MBD1Q9UIS9 605 aaPredicted RBP15.74■□□□□ 0.11
DDX55-203ENST00000421670 COQ6Q9Y2Z9 468 aa15.74■□□□□ 0.11
DDX55-203ENST00000421670 DNAH14Q0VDD8 3507 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 CCDC163A0A0D9SF12 145 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 CCDC78A2IDD5 438 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 SMAPO00193 183 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 MMP20O60882 483 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 MLNP12872 115 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 C6P13671 934 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 ECHS1P30084 290 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 OXTRP30559 389 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 SRSF5Q13243 272 aaKnown RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 ARHGEF7Q14155 803 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 NAA30Q147X3 362 aaPredicted RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 USP39Q53GS9 565 aaKnown RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 LIPIQ6XZB0 460 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 WDR5BQ86VZ2 330 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 LONP2Q86WA8 852 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 IFT20Q8IY31 132 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 ZCCHC9Q8N567 271 aaKnown RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 EID2BQ96D98 161 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 GPR63Q9BZJ6 419 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 C6orf106Q9H6K1 298 aaPredicted RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 ZFYVE1Q9HBF4 777 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 PREBQ9HCU5 417 aa15.73■□□□□ 0.11
DDX55-203ENST00000421670 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.73■□□□□ 0.11
DDX55-203ENST00000421670 ZFR2Q9UPR6 939 aaKnown RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 TP53BP1Q12888 1972 aaPredicted RBP15.73■□□□□ 0.11
DDX55-203ENST00000421670 LRRC72A6NJI9 287 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 TSPAN6O43657 245 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 RNGTTO60942 597 aaKnown RBP15.72■□□□□ 0.11
DDX55-203ENST00000421670 C1SP09871 688 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 BCKDHBP21953 392 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 MAT2AP31153 395 aaKnown RBP15.72■□□□□ 0.11
DDX55-203ENST00000421670 CAV1Q03135 178 aa15.72■□□□□ 0.11
DDX55-203ENST00000421670 PTSQ03393 145 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms