RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 GPR161Q8N6U8 529 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 PIH1D2Q8WWB5 315 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 TADA1Q96BN2 335 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 SCRN2Q96FV2 425 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 TOE1Q96GM8 510 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 GORASP1Q9BQQ3 440 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 GPR174Q9BXC1 333 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 TRABDQ9H4I3 376 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ZFYVE1Q9HBF4 777 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 RRAGDQ9NQL2 400 aaPredicted RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 USP36Q9P275 1121 aaKnown RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 SERGEFQ9UGK8 458 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 RAB23Q9ULC3 237 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 NEU2Q9Y3R4 380 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 ZNF711Q9Y462 761 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 FADS3Q9Y5Q0 445 aa8.49□□□□□ -1.05
TRIM48-201ENST00000417545 V9GYY5 206 aaPredicted RBP8.49□□□□□ -1.05
TRIM48-201ENST00000417545 IGHV1OR15-9A0A0B4J2B8 117 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 CCDC163A0A0D9SF12 145 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 CCDC78A2IDD5 438 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 HEATR9A2RTY3 570 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 NPIPB15A6NHN6 443 aaPredicted RBP8.48□□□□□ -1.05
TRIM48-201ENST00000417545 GOLGA8CPA6NN73 597 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 DLL1O00548 723 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 FZD6O60353 706 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MMP20O60882 483 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 TM7SF2O76062 418 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 TMEM63AO94886 807 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 ATXN1LP0C7T5 689 aaKnown RBP8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MLNP12872 115 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 PAMP19021 973 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MGAT1P26572 445 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MAT2AP31153 395 aaKnown RBP8.48□□□□□ -1.05
TRIM48-201ENST00000417545 ADRA1AP35348 466 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 LIG3P49916 1009 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MTM1Q13496 603 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 SETMARQ53H47 684 aaPredicted RBP8.48□□□□□ -1.05
TRIM48-201ENST00000417545 LRRC66Q68CR7 880 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 KCTD11Q693B1 232 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 HIBCHQ6NVY1 386 aaPredicted RBP8.48□□□□□ -1.05
TRIM48-201ENST00000417545 LRRC8BQ6P9F7 803 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 RANBP10Q6VN20 620 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 PRR23BQ6ZRT6 265 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 LPCAT2Q7L5N7 544 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 NLRP9Q7RTR0 991 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 LYSMD3Q7Z3D4 306 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 RGL4Q8IZJ4 473 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 NAT8LQ8N9F0 302 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MCUQ8NE86 351 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 GABPB2Q8TAK5 448 aaPredicted RBP8.48□□□□□ -1.05
TRIM48-201ENST00000417545 NSMCE3Q96MG7 304 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 SERPINB12Q96P63 405 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 TRIB3Q96RU7 358 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 PRRX2Q99811 253 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 FAM129AQ9BZQ8 928 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 IL22Q9GZX6 179 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MAGEE1Q9HCI5 957 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 CD248Q9HCU0 757 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 CD93Q9NPY3 652 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 CASS4Q9NQ75 786 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 RAD18Q9NS91 495 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 ZSCAN32Q9NX65 697 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 KCTD5Q9NXV2 234 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 MYLKQ15746 1914 aa8.48□□□□□ -1.05
TRIM48-201ENST00000417545 CEP192Q8TEP8 1941 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 PLXND1Q9Y4D7 1925 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 A0A1W2PQU0 124 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TCRBV7S3A2A0A539 114 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 SDR42E2A6NKP2 422 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 H0Y858 1186 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 PSMD11O00231 422 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 WNT9AO14904 365 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 PPFIA2O75334 1257 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 RHOBTB1O94844 696 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 CLDN7O95471 211 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 SP9P0CG40 484 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 C6P13671 934 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 LPOP22079 712 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 ADRA1DP25100 572 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 HOXA6P31267 233 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 ACSL1P33121 698 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 CNR2P34972 360 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 HADHAP40939 763 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 GRIA1P42261 906 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 MAGEA6P43360 314 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 DHPSP49366 369 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 PRAMEP78395 509 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TMPRSS15P98073 1019 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 DMWDQ09019 674 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 PDIA2Q13087 525 aaKnown RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TAF1AQ15573 450 aaPredicted RBP8.47□□□□□ -1.05
TRIM48-201ENST00000417545 CNGA3Q16281 694 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 ZNF284Q2VY69 593 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 ZNF528Q3MIS6 628 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 TMEM52BQ4KMG9 183 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 CCDC38Q502W7 563 aa8.47□□□□□ -1.05
TRIM48-201ENST00000417545 PCID2Q5JVF3 399 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms