RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 MMP21Q8N119 569 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 LINC00528Q8N1L1 170 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 NAT16Q8N8M0 369 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 DBF4BQ8NFT6 615 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 CADM4Q8NFZ8 388 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 OR52E1Q8NGJ3 308 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 OR2T34Q8NGX1 318 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 NCOA7Q8NI08 942 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 C9orf43Q8TAL5 461 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 PHOSPHO1Q8TCT1 267 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ELP5Q8TE02 316 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 PAQR8Q8TEZ7 354 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 PDCD6IPQ8WUM4 868 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 HOXB13Q92826 284 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 KAT2AQ92830 837 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 HPS1Q92902 700 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 NT5C3BQ969T7 300 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ISL2Q96A47 359 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ISG20Q96AZ6 181 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF668Q96K58 619 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 KLHL15Q96M94 604 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ANKRD27Q96NW4 1050 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 WDFY2Q96P53 400 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 TRNT1Q96Q11 434 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 PCYT2Q99447 389 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 MNTQ99583 582 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 GORASP1Q9BQQ3 440 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 C17orf80Q9BSJ5 609 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 EDEM2Q9BV94 578 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 YIPF2Q9BWQ6 316 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF341Q9BYN7 854 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 MRPL37Q9BZE1 423 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 OSBPL8Q9BZF1 889 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 DDX47Q9H0S4 455 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ATG10Q9H0Y0 220 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 TTYH1Q9H313 450 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 CCDC134Q9H6E4 229 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF552Q9H707 407 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 DCTPP1Q9H773 170 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 TDRD3Q9H7E2 651 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 RNPEPL1Q9HAU8 725 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 BCO1Q9HAY6 547 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 TMEM165Q9HC07 324 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 TLR8Q9NR97 1041 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM212BQ9NTI7 297 aaPredicted RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 WWOXQ9NZC7 414 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 PKD2L2Q9NZM6 624 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 DLGAP2Q9P1A6 1054 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 STX18Q9P2W9 335 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ASH2LQ9UBL3 628 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 HEY2Q9UBP5 337 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 TCFL5Q9UL49 500 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC6A14Q9UN76 642 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 SNX7Q9UNH6 387 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 MINPP1Q9UNW1 487 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 HPSEQ9Y251 543 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 R3HDM2Q9Y2K5 976 aaKnown RBP3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF281Q9Y2X9 895 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 NEU2Q9Y3R4 380 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 AP4B1Q9Y6B7 739 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 UBE4BO95155 1302 aa3.16□□□□□ -1.9
CTDSPL-203ENST00000416688 DHX29Q7Z478 1369 aaKnown RBP3.15□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A0A6YYJ9 748 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 C2orf92A0A1B0GVN3 265 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TTC26A0AVF1 554 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PRAMEF22A3QJZ6 481 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GSAPA4D1B5 854 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A7PA6NKC0 464 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A22PA8MWA6 464 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A12PA8MX19 464 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM90A23PA8MXZ1 464 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TARM1B6A8C7 271 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 C22orf46C9J442 243 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 H7C4K7 107 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 HIP1O00291 1037 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 QSOX1O00391 747 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 DNALI1O14645 258 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 HGSO14964 777 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 N4BP3O15049 544 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LSM1O15116 133 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CLIC2O15247 247 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TTI1O43156 1089 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TEX33O43247 280 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 PRICKLE3O43900 615 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 B4GALT2O60909 372 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 USP12O75317 370 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRN2O75325 713 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TACC1O75410 805 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 MED24O75448 989 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ECI2O75521 394 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TAF5LO75529 589 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 RGS9O75916 674 aaPredicted RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TOMM70O94826 608 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF205O95201 554 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CER1O95813 267 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 TRUB2O95900 331 aaKnown RBP3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 LGI1O95970 557 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CSTAP01040 98 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 GH1P01241 217 aa3.15□□□□□ -1.91
CTDSPL-203ENST00000416688 CD1AP06126 327 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms