RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 MPOP05164 745 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 EIF2S3P41091 472 aaKnown RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 KIAA1024LP59773 190 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 SRP54P61011 504 aaKnown RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 NR0B2Q15466 257 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 RD3Q7Z3Z2 195 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 HSD11B1LQ7Z5J1 315 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 TSPAN33Q86UF1 283 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 PQLC3Q8N755 202 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 IQCDQ96DY2 449 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 WDR92Q96MX6 357 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 DNAJC7Q99615 494 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 SIRPGQ9P1W8 387 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 RCOR3Q9P2K3 495 aaPredicted RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 KLQ9UEF7 1012 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 FASNP49327 2511 aaKnown RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 MYO1FO00160 1098 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 HEXIM1O94992 359 aaKnown RBP15.14■□□□□ 0.01
UBXN4-203ENST00000416538 RASGRP1O95267 797 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 CPP00450 1065 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 ANXA6P08133 673 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 PDHA1P08559 390 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 HSPA9P38646 679 aaKnown RBP15.14■□□□□ 0.01
UBXN4-203ENST00000416538 MMP13P45452 471 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 DUSP3P51452 185 aaPredicted RBP15.14■□□□□ 0.01
UBXN4-203ENST00000416538 RENBPP51606 427 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 GALNT2Q10471 571 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 KRT81Q14533 505 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 SLC18A3Q16572 532 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 ISXQ2M1V0 245 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 TBC1D25Q3MII6 688 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 ESRP1Q6NXG1 681 aaKnown RBP15.14■□□□□ 0.01
UBXN4-203ENST00000416538 RFLNAQ6ZTI6 216 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 CBARPQ8N350 705 aaPredicted RBP15.14■□□□□ 0.01
UBXN4-203ENST00000416538 TEX26Q8N6G2 289 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 CCL4L1Q8NHW4 92 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 PDCD6IPQ8WUM4 868 aaKnown RBP15.14■□□□□ 0.01
UBXN4-203ENST00000416538 FAF2Q96CS3 445 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 DEPDC7Q96QD5 511 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 NT5MQ9NPB1 228 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 ENTPD2Q9Y5L3 495 aa15.14■□□□□ 0.01
UBXN4-203ENST00000416538 AHCTF1Q8WYP5 2266 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 USP12O75317 370 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 PGLSO95336 258 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 ALPIP09923 528 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 VIPR1P32241 457 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 SERPINB6P35237 376 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 TRIM23P36406 574 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 GARSP41250 739 aaKnown RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 SSR1P43307 286 aaKnown RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 GABREP78334 506 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 GBE1Q04446 702 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 SLC10A2Q12908 348 aaPredicted RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 ACOX1Q15067 660 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 PAFAH1B3Q15102 231 aaKnown RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 SOWAHCQ53LP3 525 aaPredicted RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 ALG1LQ6GMV1 187 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 FSTL5Q8N475 847 aaPredicted RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 PIH1D2Q8WWB5 315 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 MAML1Q92585 1016 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 DTD2Q96FN9 168 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 ATXN7L3BQ96GX2 97 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 MCCC1Q96RQ3 725 aaPredicted RBP15.13■□□□□ 0.01
UBXN4-203ENST00000416538 RBM15Q96T37 977 aaKnown RBP eCLIP15.13■□□□□ 0.011e-7■■■■■ 40.2
UBXN4-203ENST00000416538 CHP1Q99653 195 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 SEMA3CQ99985 751 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 ZNF670Q9BS34 389 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 ASCL3Q9NQ33 180 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 CTTNBP2NLQ9P2B4 639 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 RAI2Q9Y5P3 530 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 DGKBQ9Y6T7 804 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 BPTFQ12830 3046 aa15.13■□□□□ 0.01
UBXN4-203ENST00000416538 BAHCC1Q9P281 2608 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 TMEM110-MUSTN1A8MSY1 372 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 FZD6O60353 706 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 SOD1P00441 154 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 FUCA1P04066 466 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 CTPS1P17812 591 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 HTR1BP28222 390 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 ETV3P41162 512 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 ABCG1P45844 678 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 DSC2Q02487 901 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 ANKRD20A8PQ5CZ79 823 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 C3orf38Q5JPI3 329 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 MARC1Q5VT66 337 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 DENND2CQ68D51 928 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 B3GNT8Q7Z7M8 397 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 VSTM4Q8IW00 320 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.12■□□□□ 0.01
UBXN4-203ENST00000416538 PAF1Q8N7H5 531 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 ARL10Q8N8L6 244 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 OR56A4Q8NGH8 313 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 RAPGEF5Q92565 580 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 CCDC74AQ96AQ1 378 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 NUS1Q96E22 293 aa15.12■□□□□ 0.01
UBXN4-203ENST00000416538 PRR11Q96HE9 360 aaPredicted RBP15.12■□□□□ 0.01
UBXN4-203ENST00000416538 HIC2Q96JB3 615 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms