RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SLC35C2Q9NQQ7 365 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 ZC4H2Q9NQZ6 224 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 FAM8A1Q9UBU6 413 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 RNF112Q9ULX5 631 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 CACNG2Q9Y698 323 aa20.49■□□□□ 0.87
AP1S3-205ENST00000415298 ADAM11O75078 769 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 UGT2B4P06133 528 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 SERPINA6P08185 405 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 IL10P22301 178 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PRKAR1BP31321 381 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 MAGEA11P43364 429 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 ITGA8P53708 1063 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CLCQ05315 142 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PPP3CAQ08209 521 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 AASDHQ4L235 1098 aaPredicted RBP20.48■□□□□ 0.87
AP1S3-205ENST00000415298 FAM209BQ5JX69 171 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 LDLRAP1Q5SW96 308 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 UBXN11Q5T124 520 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 COL13A1Q5TAT6 717 aaPredicted RBP20.48■□□□□ 0.87
AP1S3-205ENST00000415298 AADACL2Q6P093 401 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 LRRC8DQ7L1W4 858 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PCGF5Q86SE9 256 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 SNX29P2Q8IUI4 249 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CDRT15Q96T59 188 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 DDX28Q9NUL7 540 aaKnown RBP20.48■□□□□ 0.87
AP1S3-205ENST00000415298 RBAKQ9NYW8 714 aaPredicted RBP20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PSME2Q9UL46 239 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 A0A1W2PPM1 405 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 C7orf72A4D263 438 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CENPXA8MT69 81 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 STAG3L1P0CL83 205 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CYP2C18P33260 490 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PRKAA2P54646 552 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PTPN5P54829 565 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 ALDH18A1P54886 795 aaKnown RBP20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CBWD6Q4V339 395 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CBWD3Q5JTY5 395 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CBWD5Q5RIA9 395 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 SLC27A1Q6PCB7 646 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 CHSY1Q86X52 802 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 OR7D4Q8NG98 312 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 SLCO2A1Q92959 643 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 C9orf72Q96LT7 481 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PITHD1Q9GZP4 211 aaPredicted RBP20.48■□□□□ 0.87
AP1S3-205ENST00000415298 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 DTLQ9NZJ0 730 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 PTPRJQ12913 1337 aa20.48■□□□□ 0.87
AP1S3-205ENST00000415298 H0Y858 1186 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 NBNO60934 754 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 PROCP04070 461 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 CXCL8P10145 99 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 SELPP16109 830 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 KCNJ1P48048 391 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 GCLMP48507 274 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 RAD23AP54725 363 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 C1orf53Q5VUE5 145 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 ATG14Q6ZNE5 492 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 LINC00299Q6ZSB3 139 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 CPA6Q8N4T0 437 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 APOPT1Q96IL0 206 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 TOX2Q96NM4 488 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 KCNK16Q96T55 309 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 NXF3Q9H4D5 531 aaKnown RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 VRTNQ9H8Y1 702 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 OSGEPQ9NPF4 335 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 NXF1Q9UBU9 619 aaKnown RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 SLC24A2Q9UI40 661 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 NCANO14594 1321 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 AKAP5P24588 427 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 LEPRP48357 1165 aaKnown RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 COPAP53621 1224 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 SCRN3Q0VDG4 424 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 HSF5Q4G112 596 aaPredicted RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 LILRA2Q8N149 483 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 ZNF516Q92618 1163 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 CIDECQ96AQ7 238 aaPredicted RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 ELMO3Q96BJ8 720 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 SGK3Q96BR1 496 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 TUBA1CQ9BQE3 449 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 ADPGKQ9BRR6 497 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 TMEM121Q9BTD3 319 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 APOL6Q9BWW8 343 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 GPN2Q9H9Y4 310 aaPredicted RBP20.47■□□□□ 0.87
AP1S3-205ENST00000415298 FAM105AQ9NUU6 356 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 SCN5AQ14524 2016 aa20.47■□□□□ 0.87
AP1S3-205ENST00000415298 CROCCQ5TZA2 2017 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 MEIS3P2A8K0S8 358 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 GPR182O15218 404 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 TLR3O15455 904 aaKnown RBP20.46■□□□□ 0.87
AP1S3-205ENST00000415298 RPLP2P05387 115 aaKnown RBP20.46■□□□□ 0.87
AP1S3-205ENST00000415298 MTHFD1P11586 935 aaKnown RBP20.46■□□□□ 0.87
AP1S3-205ENST00000415298 ITGB8P26012 769 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 KRT17Q04695 432 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 DCUN1D2Q6PH85 259 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 SLC35G2Q8TBE7 412 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 TCP10LQ8TDR4 215 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 RFFLQ8WZ73 363 aa20.46■□□□□ 0.87
AP1S3-205ENST00000415298 RPRD1AQ96P16 312 aaPredicted RBP20.46■□□□□ 0.87
AP1S3-205ENST00000415298 ANKRD60Q9BZ19 345 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms