RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ADAM22Q9P0K1 906 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 WDR35Q9P2L0 1181 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 TUBD1Q9UJT1 453 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 VANGL2Q9ULK5 521 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SLC8A2Q9UPR5 921 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 ZNF510Q9Y2H8 683 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CACNA1AO00555 2505 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 SHROOM3Q8TF72 1996 aa5.02□□□□□ -1.61
VPS41-205ENST00000414632 CACNA1HO95180 2353 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ANKRD36A6QL64 1941 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TCRBV21S2A2A0A5A6 115 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 UBA6A0AVT1 1052 aaPredicted RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 KCNU1A8MYU2 1149 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 F5H5T6 163 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 I6L893 689 aaPredicted RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 DDX3XO00571 662 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-205ENST00000414632 DCLK1O15075 740 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CCP110O43303 1012 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CREB3O43889 395 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ADAM23O75077 832 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ATG13O75143 517 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CAVIN2O95810 425 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TGFB1P01137 390 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 PENKP01210 267 aaPredicted RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 GYPCP04921 128 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ITGB2P05107 769 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 GLI1P08151 1106 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CD8BP10966 210 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HLA-EP13747 358 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 MTHFD2P13995 350 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HOXB2P14652 356 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ABCB4P21439 1286 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 GPD1P21695 349 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 RRM1P23921 792 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HLA-FP30511 346 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CCR1P32246 355 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 RFC1P35251 1148 aaPredicted RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 EIF2DP41214 584 aaKnown RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 MATKP42679 507 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 IL12RB1P42701 662 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TNFRSF4P43489 277 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 SLC11A2P49281 568 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 SNX16P57768 344 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 RPL7AP62424 266 aaKnown RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 KLHL30Q0D2K2 578 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 PLA2G4EQ3MJ16 856 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 FSCBQ5H9T9 825 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 MS4A13Q5J8X5 152 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 NKAPLQ5M9Q1 402 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 DAB2IPQ5VWQ8 1189 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TMEM215Q68D42 235 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 DNAJC24Q6P3W2 148 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TRIM72Q6ZMU5 477 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 PRR23BQ6ZRT6 265 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CHST9Q7L1S5 443 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 MON1BQ7L1V2 547 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ASCL5Q7RTU5 278 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TMC6Q7Z403 805 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ANKS1BQ7Z6G8 1248 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 FAM131BQ86XD5 332 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ZDHHC17Q8IUH5 632 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CILP2Q8IUL8 1156 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 MFN1Q8IWA4 741 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 FAM217AQ8IXS0 508 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CPXM2Q8N436 756 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CCDC185Q8N715 623 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 FRMD1Q8N878 549 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ATP6V0D2Q8N8Y2 350 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 IL17RCQ8NAC3 791 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HJURPQ8NCD3 748 aaPredicted RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 ZBTB34Q8NCN2 500 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HIPK4Q8NE63 616 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ZNF397Q8NF99 534 aaPredicted RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 TSTD1Q8NFU3 115 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HMGB4Q8WW32 186 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 RXFP2Q8WXD0 754 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 IGSF8Q969P0 613 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TMA16Q96EY4 203 aaKnown RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 MCEEQ96PE7 176 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 PRMT1Q99873 361 aaKnown RBP5.01□□□□□ -1.61
VPS41-205ENST00000414632 SYT11Q9BT88 431 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-205ENST00000414632 TRIM62Q9BVG3 475 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 SELENOOQ9BVL4 669 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 TKTL2Q9H0I9 626 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 KCNH6Q9H252 994 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 MTG2Q9H4K7 406 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CD93Q9NPY3 652 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 ABCB8Q9NUT2 735 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-205ENST00000414632 ASNSD1Q9NWL6 643 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 BCCIPQ9P287 314 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-205ENST00000414632 MYO1AQ9UBC5 1043 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 FBXO4Q9UKT5 387 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 STAP1Q9ULZ2 295 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 MMP17Q9ULZ9 603 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 SLC5A6Q9Y289 635 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 DAAM1Q9Y4D1 1078 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 HS3ST4Q9Y661 456 aa5.01□□□□□ -1.61
VPS41-205ENST00000414632 CFAP54Q96N23 3096 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms