RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 HLA-DPA1P20036 260 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 LHCGRP22888 699 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 PSMB4P28070 264 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 CD38P28907 300 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 ARHGEF7Q14155 803 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 CCDC6Q16204 474 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 CRTC1Q6UUV9 634 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 PRR23CQ6ZRP0 262 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 NYAP1Q6ZVC0 841 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 ATL2Q8NHH9 583 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 KLK6Q92876 244 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 CENPTQ96BT3 561 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 LRRC45Q96CN5 670 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 COQ10AQ96MF6 247 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 SLC6A18Q96N87 628 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 KLF6Q99612 283 aaPredicted RBP16.52■□□□□ 0.24
LINC00398-201ENST00000414407 GORASP1Q9BQQ3 440 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 MAGEE1Q9HCI5 957 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 GOLGA6AQ9NYA3 693 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 SLCO1B1Q9Y6L6 691 aa16.52■□□□□ 0.24
LINC00398-201ENST00000414407 TRPM6Q9BX84 2022 aa16.52■□□□□ 0.23
LINC00398-201ENST00000414407 ZNF185O15231 689 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 FANCGO15287 622 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 PSMD3O43242 534 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 LZTS3O60299 673 aaPredicted RBP16.51■□□□□ 0.23
LINC00398-201ENST00000414407 MAGEC1O60732 1142 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 IFNB1P01574 187 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 TUBB4AP04350 444 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 SYPP08247 313 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 ALPIP09923 528 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 CSNK1EP49674 416 aaKnown RBP16.51■□□□□ 0.23
LINC00398-201ENST00000414407 IRX4P78413 519 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 SEMG2Q02383 582 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 GALNT3Q14435 633 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 CNGA3Q16281 694 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 KDELC2Q7Z4H8 507 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 ABI3BPQ7Z7G0 1075 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 CREG2Q8IUH2 290 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 CCDC89Q8N998 374 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
LINC00398-201ENST00000414407 FSD1LQ9BXM9 530 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 AP1M1Q9BXS5 423 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 SMOC1Q9H4F8 434 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.51■□□□□ 0.23
LINC00398-201ENST00000414407 PAK5Q9P286 719 aa16.51■□□□□ 0.23
LINC00398-201ENST00000414407 ERI2A8K979 691 aaKnown RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 A8MX80 341 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 ARHGAP33O14559 1287 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 FPGTO14772 594 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 WNT9AO14904 365 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 RAD51BO15315 384 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 RECQL5O94762 991 aaPredicted RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 METTL18O95568 372 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 FGF1P05230 155 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 ATXN1LP0C7T5 689 aaKnown RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 GM2AP17900 193 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 CASQ1P31415 396 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 ADRA1AP35348 466 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 FDFT1P37268 417 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 FNTAP49354 379 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 LRRC14Q15048 493 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 SF3A2Q15428 464 aaKnown RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 SLC1A5Q15758 541 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 CDKN3Q16667 212 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 LRRC66Q68CR7 880 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 KCTD11Q693B1 232 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 TCEAL6Q6IPX3 200 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 IL27RAQ6UWB1 636 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 RANBP10Q6VN20 620 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 KYAT3Q6YP21 454 aaKnown RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 GCNT7Q6ZNI0 430 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 GSTA5Q7RTV2 222 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 TSPAN33Q86UF1 283 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 ALYREFQ86V81 257 aaKnown RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 DCP2Q8IU60 420 aaKnown RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 TP53I13Q8NBR0 393 aaPredicted RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 IPMKQ8NFU5 416 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 TCEAL3Q969E4 200 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 TRABDQ9H4I3 376 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 FEZ2Q9UHY8 353 aaPredicted RBP16.5■□□□□ 0.23
LINC00398-201ENST00000414407 ANKRD6Q9Y2G4 727 aa16.5■□□□□ 0.23
LINC00398-201ENST00000414407 A0A1B0GVT2 93 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 LNP1A1A4G5 178 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 RGSL1A5PLK6 1076 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 A6NNZ2 444 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 F5H423 210 aaPredicted RBP16.49■□□□□ 0.23
LINC00398-201ENST00000414407 TLR4O00206 839 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 PHF2O75151 1096 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 WNT1P04628 370 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
LINC00398-201ENST00000414407 KCNJ1P48048 391 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 C21orf59P57076 290 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 PTSQ03393 145 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 ACOX1Q15067 660 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 WSCD2Q2TBF2 565 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 SIRPB2Q5JXA9 342 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 RIF1Q5UIP0 2472 aaKnown RBP16.49■□□□□ 0.23
LINC00398-201ENST00000414407 SYT10Q6XYQ8 523 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 TECPR1Q7Z6L1 1165 aa16.49■□□□□ 0.23
LINC00398-201ENST00000414407 NLRP8Q86W28 1048 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms