RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 UBA3Q8TBC4 463 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CPT1CQ8TCG5 803 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 LRRC8CQ8TDW0 803 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 DQX1Q8TE96 717 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 GLMPQ8WWB7 406 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 THAP4Q8WY91 577 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SSH1Q8WYL5 1049 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 EDAQ92838 391 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MUL1Q969V5 352 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RNF125Q96EQ8 232 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NEIL1Q96FI4 390 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ZNF274Q96GC6 653 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ELMO2Q96JJ3 720 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 CEP170P1Q96L14 293 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 TWNKQ96RR1 684 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 TESK2Q96S53 571 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 P2RX7Q99572 595 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RBM4BQ9BQ04 359 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RBM4Q9BWF3 364 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ADGRE3Q9BY15 652 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 TRIM54Q9BYV2 358 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RAB33BQ9H082 229 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 OR51V1Q9H2C8 321 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MUC13Q9H3R2 512 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PHAXQ9H814 394 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 BRF2Q9HAW0 419 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 EPB41L5Q9HCM4 733 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PIH1D3Q9NQM4 214 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ABCB8Q9NUT2 735 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SMPD4Q9NXE4 827 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 KLHL28Q9NXS3 571 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SAMD15Q9P1V8 674 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MARCH4Q9P2E8 410 aaPredicted RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ASH2LQ9UBL3 628 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 ANAPC2Q9UJX6 822 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 RWDD3Q9Y3V2 267 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 SAMHD1Q9Y3Z3 626 aaKnown RBP3.67□□□□□ -1.82
SF3B1-203ENST00000414174 NFE2L3Q9Y4A8 694 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 USP16Q9Y5T5 823 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 LYVE1Q9Y5Y7 322 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 PSAT1Q9Y617 370 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 MAD1L1Q9Y6D9 718 aa3.67□□□□□ -1.82
SF3B1-203ENST00000414174 A0A075B6Q4 140 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TYW5A2RUC4 315 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 BLACEA4D250 179 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 RASGRF2O14827 1237 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FFAR3O14843 346 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SYN3O14994 580 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 NKRFO15226 690 aaKnown RBP eCLIP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 EIF3DO15371 548 aaKnown RBP eCLIP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 NPHS1O60500 1241 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 GAS7O60861 476 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ENTPD3O75355 529 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MTX2O75431 263 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FRAT2O75474 233 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TADA2AO75478 443 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 AKR7A3O95154 331 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 IL18RAPO95256 599 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 LCA5LO95447 670 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 VNN2O95498 520 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 C22orf31O95567 290 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TGM6O95932 706 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CHEK2O96017 543 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 EPHX1P07099 455 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CD3EP07766 207 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 IGFBP1P08833 259 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DBHP09172 617 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CYP2C9P11712 490 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DARSP14868 501 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 JUPP14923 745 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ITGA2P17301 1181 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 EIF2S2P20042 333 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PTPN3P26045 913 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 CST5P28325 142 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 HMOX2P30519 316 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 LRPAP1P30533 357 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ACVRL1P37023 503 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MCAMP43121 646 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 GABRB2P47870 512 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 ALDH1A3P47895 512 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KCNJ5P48544 419 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SLC11A2P49281 568 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 GNAQP50148 359 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 EIF3BP55884 814 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 RPS8P62241 208 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 YWHAEP62258 255 aaKnown RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PSMC6P62333 389 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 FAM189BP81408 668 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SPIBQ01892 262 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 TNFRSF17Q02223 184 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PLOD1Q02809 727 aaPredicted RBP3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SCN1BQ07699 218 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 KLC1Q07866 573 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SCRN3Q0VDG4 424 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 MAB21L1Q13394 359 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DRP2Q13474 957 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 SLC12A1Q13621 1099 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 PTK6Q13882 451 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 DAG1Q14118 895 aa3.66□□□□□ -1.82
SF3B1-203ENST00000414174 GAMTQ14353 236 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms