RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	TMEM131	Q92545	1883 aa		13.2	□□□□□ -0.3
SF1-206	ENST00000413725	OTOGL	Q3ZCN5	2332 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	CABIN1	Q9Y6J0	2220 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	C1orf232	A0A0U1RR37	186 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	IGLON5	A6NGN9	336 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725		A8MX80	341 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	PSMD11	O00231	422 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	LAT	O43561	262 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	LZTS3	O60299	673 aa	Predicted RBP	13.19	□□□□□ -0.3
SF1-206	ENST00000413725	MMP20	O60882	483 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	HEXIM1	O94992	359 aa	Known RBP	13.19	□□□□□ -0.3
SF1-206	ENST00000413725	IGHV4-34	P06331	123 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	ATXN1L	P0C7T5	689 aa	Known RBP	13.19	□□□□□ -0.3
SF1-206	ENST00000413725	MAT2A	P31153	395 aa	Known RBP	13.19	□□□□□ -0.3
SF1-206	ENST00000413725	HNF1B	P35680	557 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	ADCY8	P40145	1251 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	NBL1	P41271	181 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	PTGIR	P43119	386 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	CHRNA4	P43681	627 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	LIG3	P49916	1009 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	CDK16	Q00536	496 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	SEMG2	Q02383	582 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	SGCG	Q13326	291 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	SPARCL1	Q14515	664 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	ZNF284	Q2VY69	593 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	TMEM259	Q4ZIN3	620 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	SEL1L3	Q68CR1	1132 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	LRRC66	Q68CR7	880 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	LIPI	Q6XZB0	460 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	PPP1R21	Q6ZMI0	780 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	ARMCX6	Q7L4S7	300 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	CYP2U1	Q7Z449	544 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	JAML	Q86YT9	394 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	RGL4	Q8IZJ4	473 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	LOXL4	Q96JB6	756 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	APOL2	Q9BQE5	337 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	MAGEE1	Q9HCI5	957 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	FAM86C1	Q9NVL1	165 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	HACD3	Q9P035	362 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	ZFR2	Q9UPR6	939 aa	Known RBP	13.19	□□□□□ -0.3
SF1-206	ENST00000413725	DMTF1	Q9Y222	760 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	PIKFYVE	Q9Y2I7	2098 aa		13.19	□□□□□ -0.3
SF1-206	ENST00000413725	GPR179	Q6PRD1	2367 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	ZFC3H1	O60293	1989 aa	Known RBP	13.18	□□□□□ -0.3
SF1-206	ENST00000413725		A0A1W2PPC4	97 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CTAGE15	A4D2H0	777 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	FAM187A	A6NFU0	413 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	C10orf142	B7Z368	130 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	TTI1	O43156	1089 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	USP12	O75317	370 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	SUN1	O94901	812 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CTAGE8	P0CG41	777 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	C6	P13671	934 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	TPSB2	P20231	275 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	LHCGR	P22888	699 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CD27	P26842	260 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	PTGER3	P43115	390 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	SARNP	P82979	210 aa	Known RBP	13.18	□□□□□ -0.3
SF1-206	ENST00000413725	ACOX1	Q15067	660 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	TPSAB1	Q15661	275 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CNGA3	Q16281	694 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	LPAL2	Q16609	132 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	DENND2C	Q68D51	928 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	LAIR1	Q6GTX8	287 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CRTC1	Q6UUV9	634 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	PCGF5	Q86SE9	256 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	TSPAN33	Q86UF1	283 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CTAGE6	Q86UF2	777 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CTAGE4	Q8IX94	777 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	CEP112	Q8N8E3	955 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	DNAAF3	Q8N9W5	541 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	ASB12	Q8WXK4	309 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	DNASE2B	Q8WZ79	361 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	KLK6	Q92876	244 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	SMIM14	Q96QK8	99 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	C1QTNF2	Q9BXJ5	285 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	SLC17A9	Q9BYT1	436 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	GPR63	Q9BZJ6	419 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	TRABD	Q9H4I3	376 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	ARNT2	Q9HBZ2	717 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	KCTD5	Q9NXV2	234 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	EIF2B4	Q9UI10	523 aa	Known RBP	13.18	□□□□□ -0.3
SF1-206	ENST00000413725	ZNF711	Q9Y462	761 aa		13.18	□□□□□ -0.3
SF1-206	ENST00000413725	FAM186A	A6NE01	2351 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	PLXNB3	Q9ULL4	1909 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	PRAMEF26	H0Y7S4	382 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	AP3B1	O00203	1094 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	NDC80	O14777	642 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	SLC31A1	O15431	190 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	PIRT	P0C851	137 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	GNS	P15586	552 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	HNRNPA2B1	P22626	353 aa	Known RBP	13.17	□□□□□ -0.3
SF1-206	ENST00000413725	ITPKA	P23677	461 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	AKT2	P31751	481 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	MAGEA6	P43360	314 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	CREB5	Q02930	508 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	CDH17	Q12864	832 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	OLIG2	Q13516	323 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	KCNJ11	Q14654	390 aa		13.17	□□□□□ -0.3
SF1-206	ENST00000413725	LYSMD3	Q7Z3D4	306 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms