RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PTGER3P43115 390 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 TUFMP49411 452 aaKnown RBP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 CRADDP78560 199 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 PLD1Q13393 1074 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 DBN1Q16643 649 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 ZNF423Q2M1K9 1284 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 C10orf120Q5SQS8 335 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 RNF187Q5TA31 235 aaPredicted RBP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 SNX30Q5VWJ9 437 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 CGB2Q6NT52 195 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 ARHGAP36Q6ZRI8 547 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 FRMD1Q8N878 549 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 TSTD1Q8NFU3 115 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 KLF6Q99612 283 aaPredicted RBP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 PITPNM3Q9BZ71 974 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 IQCGQ9H095 443 aaKnown RBP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 SCUBE2Q9NQ36 999 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 SLC17A7Q9P2U7 560 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 SOX13Q9UN79 622 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 RPS6KL1Q9Y6S9 549 aa17.25■□□□□ 0.35
PTPRC-206ENST00000413409 MYO18AQ92614 2054 aaKnown RBP17.25■□□□□ 0.35
PTPRC-206ENST00000413409 SLC12A8A0AV02 714 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 DRGXA6NNA5 263 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 GOLGA8RI6L899 631 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 UGT1A9O60656 530 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 GJA4P35212 333 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 GP5P40197 560 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ALDH1A3P47895 512 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 MAPKAPK2P49137 400 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 PAPOLAP51003 745 aaKnown RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 C19orf57Q0VDD7 668 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 FBXO43Q4G163 708 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ARHGAP15Q53QZ3 475 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ANO7Q6IWH7 933 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ARMCX6Q7L4S7 300 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 PNPLA1Q8N8W4 532 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 PTCD2Q8WV60 388 aaKnown RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ZNF75CPQ92670 426 aaPredicted RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ISL2Q96A47 359 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 ZNF669Q96BR6 464 aaPredicted RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 SRPK1Q96SB4 655 aaKnown RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 CPNE1Q99829 537 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 TBL1YQ9BQ87 522 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 UGT1A7Q9HAW7 530 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 UGT1A10Q9HAW8 530 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 UGT1A8Q9HAW9 530 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 IPO11Q9UI26 975 aaKnown RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 HECTD1Q9ULT8 2610 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 KIAA1549LQ6ZVL6 1849 aa17.24■□□□□ 0.35
PTPRC-206ENST00000413409 TNRC6BQ9UPQ9 1833 aaKnown RBP17.24■□□□□ 0.35
PTPRC-206ENST00000413409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 HMX2A2RU54 273 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 KLF11O14901 512 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 TLR5O60602 858 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 CD59P13987 128 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 CRHR1P34998 444 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 BMPR2Q13873 1038 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 HNRNPDQ14103 355 aaKnown RBP17.23■□□□□ 0.35
PTPRC-206ENST00000413409 C5orf22Q49AR2 442 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ANKRD20A4Q4UJ75 823 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 GRTP1Q5TC63 336 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 KLHDC10Q6PID8 442 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 SLC23A3Q6PIS1 610 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 TRPM8Q7Z2W7 1104 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 SYT12Q8IV01 421 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 TMEFF1Q8IYR6 380 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 GBP7Q8N8V2 638 aaPredicted RBP17.23■□□□□ 0.35
PTPRC-206ENST00000413409 OR2I1PQ8NGU4 316 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ZNF398Q8TD17 642 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 USP33Q8TEY7 942 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 RLN3Q8WXF3 142 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ACDQ96AP0 544 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 CAMK1GQ96NX5 476 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 KIFC1Q9BW19 673 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 MRM3Q9HC36 420 aaKnown RBP17.23■□□□□ 0.35
PTPRC-206ENST00000413409 NDFIP2Q9NV92 336 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 PIH1D1Q9NWS0 290 aaKnown RBP17.23■□□□□ 0.35
PTPRC-206ENST00000413409 NSMCE4AQ9NXX6 385 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 MPP6Q9NZW5 540 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ZFATQ9P243 1243 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ZNF212Q9UDV6 495 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 PLLPQ9Y342 182 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ASB3Q9Y575 518 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ADAMTS9Q9P2N4 1935 aa17.23■□□□□ 0.35
PTPRC-206ENST00000413409 ZCWPW2A0A1B0GU75 182 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 USP12O75317 370 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 FGF19O95750 216 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 PEX11BO96011 259 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 HLA-DQB2P05538 268 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 HNRNPLP14866 589 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTPRC-206ENST00000413409 SERPINB4P48594 390 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 CSE1LP55060 971 aaKnown RBP17.22■□□□□ 0.35
PTPRC-206ENST00000413409 CCDC15Q0P6D6 951 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 PARP15Q460N3 678 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 CMTM8Q8IZV2 173 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms