RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 DLGAP2Q9P1A6 1054 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 CNOT8Q9UFF9 292 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 HOOK1Q9UJC3 728 aaKnown RBP4.64□□□□□ -1.67
BRCA1-204ENST00000412061 SLC25A13Q9UJS0 675 aa4.64□□□□□ -1.67
BRCA1-204ENST00000412061 LOC100509620A0A075B734 347 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 A0A1W2PRG0 241 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 TCRBV21S2A2A0A5A6 115 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 CCNT1O60563 726 aaKnown RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 FZD7O75084 574 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SLCO2B1O94956 709 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 KRT4P19013 534 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 WT1P19544 449 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SP100P23497 879 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 STAT6P42226 847 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 VPS41P49754 854 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 CAPZA1P52907 286 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 CACNA2D1P54289 1103 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 PNLIPRP2P54317 469 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 F2RL1P55085 397 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 CYP4A11Q02928 519 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 KLHL30Q0D2K2 578 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 GAB1Q13480 694 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ITGA7Q13683 1181 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 PPP2R5BQ15173 497 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 MEP1BQ16820 701 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ANKDD1AQ495B1 522 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 GXYLT1Q4G148 440 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 GLE1Q53GS7 698 aaKnown RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 AKNAD1Q5T1N1 836 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 LINC00696Q6ZRV3 163 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 RBPMS2Q6ZRY4 209 aaKnown RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 MSANTD1Q6ZTZ1 278 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 RNF144BQ7Z419 303 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 AACSQ86V21 672 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 LURAP1LQ8IV03 231 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 FAM217AQ8IXS0 508 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SAMD14Q8IZD0 417 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 PI4KAP1Q8N8J0 262 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ENDOVQ8N8Q3 282 aaKnown RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 XXYLT1Q8NBI6 393 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ZNF540Q8NDQ6 660 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 MCUQ8NE86 351 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ANKRD20A12PQ8NF67 263 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 DENND1AQ8TEH3 1009 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 C2CD4CQ8TF44 421 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ZNF622Q969S3 477 aaKnown RBP eCLIP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 FERMT1Q9BQL6 677 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SYT17Q9BSW7 474 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SPXQ9BT56 116 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 IFIH1Q9BYX4 1025 aaKnown RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 PLK3Q9H4B4 646 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SFXN1Q9H9B4 322 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 CPNE5Q9HCH3 593 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 IL1RAPL2Q9NP60 686 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 ASNSD1Q9NWL6 643 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 DCAF16Q9NXF7 216 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 MCM9Q9NXL9 1143 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 KIAA1456Q9P272 454 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 A4GNTQ9UNA3 340 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 B3GNT3Q9Y2A9 372 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 KCNK7Q9Y2U2 307 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 HS3ST3A1Q9Y663 406 aa4.63□□□□□ -1.67
BRCA1-204ENST00000412061 SIRT4Q9Y6E7 314 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-204ENST00000412061 UBE2Q2LH0YL09 131 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 PRYO14603 147 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 PGRMC2O15173 223 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SPRY1O43609 319 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 HBP1O60381 514 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SOCS5O75159 536 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 EEF2P13639 858 aaKnown RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 PKMP14618 531 aaKnown RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 TMEM11P17152 192 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 GPD1P21695 349 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SFPQP23246 707 aaKnown RBP eCLIP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 POU1F1P28069 291 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 GSTM2P28161 218 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 GJC1P36383 396 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SLC37A1P57057 533 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 TUBB4BP68371 445 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 HMGN5P82970 282 aaKnown RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 WSCD2Q2TBF2 565 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 MOB3CQ70IA8 216 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 CAMKMTQ7Z624 323 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 FAM160B2Q86V87 743 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 HOOK3Q86VS8 718 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 WDR63Q8IWG1 891 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 GHDCQ8N2G8 530 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 AMER2Q8N7J2 671 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 TC2NQ8N9U0 490 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 IQUBQ8NA54 791 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 CAMKVQ8NCB2 501 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SETD9Q8NE22 299 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 ZFAND2BQ8WV99 257 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 REPS1Q96D71 796 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 LINC00615Q96LM1 132 aaPredicted RBP4.62□□□□□ -1.67
BRCA1-204ENST00000412061 PRAM1Q96QH2 718 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 OR2A14Q96R47 310 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 MGME1Q9BQP7 344 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 SLC25A23Q9BV35 468 aa4.62□□□□□ -1.67
BRCA1-204ENST00000412061 NUP85Q9BW27 656 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms