RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 UBXN10Q96LJ8 280 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 ZNF597Q96LX8 424 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 AKTIPQ9H8T0 292 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 PREBQ9HCU5 417 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 BCAP29Q9UHQ4 241 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 CROTQ9UKG9 612 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 AURKCQ9UQB9 309 aa14.28□□□□□ -0.12
ATRIP-204ENST00000412052 AKAP10O43572 662 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 SRP72O76094 671 aaKnown RBP14.27□□□□□ -0.12
ATRIP-204ENST00000412052 MMP2P08253 660 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 KIF19Q2TAC6 998 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 FAM171BQ6P995 826 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 LARP4Q71RC2 724 aaKnown RBP eCLIP14.27□□□□□ -0.12
ATRIP-204ENST00000412052 LCA5Q86VQ0 697 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 TMEM126BQ8IUX1 230 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 CPNE9Q8IYJ1 553 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.12
ATRIP-204ENST00000412052 CCT7Q99832 543 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 OLAHQ9NV23 265 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 SLC38A7Q9NVC3 462 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 POLR3BQ9NW08 1133 aaPredicted RBP14.27□□□□□ -0.12
ATRIP-204ENST00000412052 DUS2Q9NX74 493 aaKnown RBP14.27□□□□□ -0.12
ATRIP-204ENST00000412052 VWA7Q9Y334 891 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 DNAJC15Q9Y5T4 150 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 ACTL7AQ9Y615 435 aa14.27□□□□□ -0.12
ATRIP-204ENST00000412052 TCRBV3S1A0A5B6 114 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 TMX2-CTNND1H3BSU7 103 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 UBXN8O00124 270 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 NME4O00746 187 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 TBX18O95935 607 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 CHRNA1P02708 482 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 CDH2P19022 906 aaPredicted RBP14.27□□□□□ -0.13
ATRIP-204ENST00000412052 CAPN3P20807 821 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 GRIK1P39086 918 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 LEPRP48357 1165 aaKnown RBP14.27□□□□□ -0.13
ATRIP-204ENST00000412052 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
ATRIP-204ENST00000412052 SEMA3AQ14563 771 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 GEN1Q17RS7 908 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 ZNF678Q5SXM1 525 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 CARM1Q86X55 608 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 SPPL2CQ8IUH8 684 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 RTL3Q8N8U3 475 aaKnown RBP14.27□□□□□ -0.13
ATRIP-204ENST00000412052 PSMG2Q969U7 264 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 C19orf60Q96EN9 201 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 TBATAQ96M53 351 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 RANBP9Q96S59 729 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 PKMYT1Q99640 499 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 TMEM181Q9P2C4 612 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 MAP10Q9P2G4 905 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 DMTF1Q9Y222 760 aa14.27□□□□□ -0.13
ATRIP-204ENST00000412052 H3BMM5 538 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 AP3B1O00203 1094 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 HTRA2O43464 458 aaPredicted RBP14.26□□□□□ -0.13
ATRIP-204ENST00000412052 MT-ND1P03886 318 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 OXTRP30559 389 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 HOXC13P31276 330 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 TIAL1Q01085 375 aaKnown RBP eCLIP14.26□□□□□ -0.13
ATRIP-204ENST00000412052 ZNF549Q6P9A3 640 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 PGBD5Q8N414 524 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 FAM47BQ8NA70 645 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 CATSPERBQ9H7T0 1116 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 ATXN10Q9UBB4 475 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 SARDHQ9UL12 918 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 ARL5AQ9Y689 179 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 TANC1Q9C0D5 1861 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 PIP5K1BO14986 540 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 S1PR4O95977 384 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 CDK4P11802 303 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 GPX3P22352 226 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 DNAJB2P25686 324 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 MRPS6P82932 125 aaKnown RBP14.26□□□□□ -0.13
ATRIP-204ENST00000412052 OR4D1Q15615 310 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 USP41Q3LFD5 358 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 UGT3A2Q3SY77 523 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 KLC3Q6P597 504 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 EPHX4Q8IUS5 362 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 PTGR2Q8N8N7 351 aaPredicted RBP14.26□□□□□ -0.13
ATRIP-204ENST00000412052 IRGQQ8WZA9 623 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 SMIM14Q96QK8 99 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 NDUFA13Q9P0J0 144 aa14.26□□□□□ -0.13
ATRIP-204ENST00000412052 UXTQ9UBK9 157 aaPredicted RBP14.26□□□□□ -0.13
ATRIP-204ENST00000412052 LAMA2P24043 3122 aaKnown RBP14.25□□□□□ -0.13
ATRIP-204ENST00000412052 A0A0J9YYE9 177 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 B4GALT3O60512 393 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 SEC24DO94855 1032 aaPredicted RBP14.25□□□□□ -0.13
ATRIP-204ENST00000412052 ODC1P11926 461 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 PSMD8P48556 350 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 PURAQ00577 322 aaKnown RBP14.25□□□□□ -0.13
ATRIP-204ENST00000412052 PLOD1Q02809 727 aaPredicted RBP14.25□□□□□ -0.13
ATRIP-204ENST00000412052 PRKCQQ04759 706 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 PFKFB4Q16877 469 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 LRRC23Q53EV4 343 aaPredicted RBP14.25□□□□□ -0.13
ATRIP-204ENST00000412052 SIRPB2Q5JXA9 342 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 CXCL17Q6UXB2 119 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 ZBTB49Q6ZSB9 765 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 DHFR2Q86XF0 187 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 TRIML2Q8N7C3 387 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 OR13C4Q8NGS5 318 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 MYEOVQ96EZ4 313 aa14.25□□□□□ -0.13
ATRIP-204ENST00000412052 IMP4Q96G21 291 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms