RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 ZMYND8Q9ULU4 1186 aaPredicted RBP0.42□□□□□ -2.34
RNU6-554P-201ENST00000410466 A0A087WZ62 844 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 LOC105369274A0A096LPK9 316 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 LOC102723532A0A0G2JNH3 316 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 A0A1W2PP11 408 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 CTSVO60911 334 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 LY6G6DO95868 133 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 TSHBP01222 138 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 NR3C1P04150 777 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 PROS1P07225 676 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 VIL1P09327 827 aaKnown RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 TFPIP10646 304 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 VCAM1P19320 739 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 RBMS1P29558 406 aaKnown RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 SKIV2L2P42285 1042 aaKnown RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 CLCNKAP51800 687 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 HDAC4P56524 1084 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 KRTAP12-3P60328 96 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 PNLIPRP3Q17RR3 467 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 CCDC96Q2M329 555 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 GTDC1Q4AE62 458 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 IFIT1BQ5T764 474 aaKnown RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 FAM171BQ6P995 826 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 TMTC1Q8IUR5 882 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 OR4N4Q8N0Y3 316 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 CLEC4CQ8WTT0 213 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 RNF183Q96D59 192 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 LINGO1Q96FE5 620 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 SERAC1Q96JX3 654 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 NUP88Q99567 741 aaPredicted RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 CADM1Q9BY67 442 aaKnown RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 FAM126AQ9BYI3 521 aaPredicted RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 C22orf23Q9BZE7 217 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 PARLQ9H300 379 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 PDFQ9HBH1 243 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 ZNF71Q9NQZ8 489 aaPredicted RBP0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 NUDT4Q9NZJ9 180 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 MUTYHQ9UIF7 546 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 TPCN1Q9ULQ1 816 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 JRKLQ9Y4A0 524 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 ITGB4P16144 1822 aa0.41□□□□□ -2.34
RNU6-554P-201ENST00000410466 FAM205AQ6ZU69 1335 aa0.4□□□□□ -2.34
RNU6-554P-201ENST00000410466 TAF1P21675 1872 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 CTAGE9A4FU28 777 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 ACOD1A6NK06 481 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 SOCS3O14543 225 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 TNPO2O14787 897 aaKnown RBP0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 HDAC3O15379 428 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 FRS3O43559 492 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 GPRIN2O60269 458 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 C22orf31O95567 290 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 P0C879 139 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 CTAGE8P0CG41 777 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 SRGAP2BP0DMP2 458 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 FOLR2P14207 255 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 FDPSP14324 419 aaKnown RBP0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 CTPS1P17812 591 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 EGR1P18146 543 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 ISL1P61371 349 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 ARHGAP15Q53QZ3 475 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 XKR3Q5GH77 459 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 RRAGBQ5VZM2 374 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 OLFML2AQ68BL7 652 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 APOA5Q6Q788 366 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 SLC47A2Q86VL8 602 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 MON1AQ86VX9 555 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 CTAGE4Q8IX94 777 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 VPS52Q8N1B4 723 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 C11orf42Q8N5U0 333 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 OR52I2Q8NH67 350 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 RASSF8Q8NHQ8 419 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 TYMSOSQ8TAI1 123 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 PPP1R35Q8TAP8 253 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 PPM1EQ8WY54 764 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 HERVK_113Q902F9 699 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 TOMM40LQ969M1 308 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 PRAC1Q96KF2 57 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 NSMCE3Q96MG7 304 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 NEURL2Q9BR09 285 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 HDHD5Q9BXW7 423 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 YTHDF1Q9BYJ9 559 aaKnown RBP0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 ZNF287Q9HBT7 754 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 SIX2Q9NPC8 291 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 FSCN3Q9NQT6 498 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 ANKRD10Q9NXR5 420 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 POLG2Q9UHN1 485 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 TENM3Q9P273 2699 aa0.4□□□□□ -2.35
RNU6-554P-201ENST00000410466 J3KTA2 159 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 DHHO43323 396 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 HPRP00739 348 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 ANXA2P07355 339 aaKnown RBP0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 ITGA3P26006 1051 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 WNT5AP41221 380 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 NR2C2P49116 596 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 ARHGAP8P85298 464 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 RNASELQ05823 741 aaKnown RBP0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 ZNF234Q14588 700 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 PUM3Q15397 648 aaKnown RBP0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 ZNF79Q15937 498 aa0.39□□□□□ -2.35
RNU6-554P-201ENST00000410466 SLC5A9Q2M3M2 681 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms