RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 EIF3IQ13347 325 aaKnown RBP14.56□□□□□ -0.08
MCF2L-210ENST00000409954 ACOX1Q15067 660 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 HADHQ16836 314 aaKnown RBP14.56□□□□□ -0.08
MCF2L-210ENST00000409954 TDRD12Q587J7 1177 aaKnown RBP14.56□□□□□ -0.08
MCF2L-210ENST00000409954 C3orf38Q5JPI3 329 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 HGSNATQ68CP4 663 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 CRTC1Q6UUV9 634 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 TAF8Q7Z7C8 310 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 PLA2G15Q8NCC3 412 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 GPR156Q8NFN8 814 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 PCDH19Q8TAB3 1148 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 SLC39A7Q92504 469 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 HSPH1Q92598 858 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 FUBP1Q96AE4 644 aaKnown RBP14.56□□□□□ -0.08
MCF2L-210ENST00000409954 SCRN2Q96FV2 425 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 CSPG4P5Q96PW8 444 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 GFM1Q96RP9 751 aaKnown RBP14.56□□□□□ -0.08
MCF2L-210ENST00000409954 RCOR3Q9P2K3 495 aaPredicted RBP14.56□□□□□ -0.08
MCF2L-210ENST00000409954 APPL1Q9UKG1 709 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 PCDHGC4Q9Y5F7 938 aa14.56□□□□□ -0.08
MCF2L-210ENST00000409954 TMEM202A6NGA9 273 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 CAPN8A6NHC0 703 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 PSMD11O00231 422 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 KLK10O43240 276 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 PEX11BO96011 259 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 CELA2BP08218 269 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-210ENST00000409954 CYP2A6P11509 494 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-210ENST00000409954 GLB1P16278 677 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 CES1P23141 567 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 TMPRSS3P57727 454 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 CXADRP78310 365 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 FANCCQ00597 558 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 FAM46DQ8NEK8 389 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 WBP1Q96G27 269 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 LIN37Q96GY3 246 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-210ENST00000409954 PRR11Q96HE9 360 aaPredicted RBP14.55□□□□□ -0.08
MCF2L-210ENST00000409954 NAF1Q96HR8 494 aaKnown RBP14.55□□□□□ -0.08
MCF2L-210ENST00000409954 COQ10AQ96MF6 247 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 TMEM74Q96NL1 305 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 FUCA2Q9BTY2 467 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 STRADBQ9C0K7 418 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 NOD2Q9HC29 1040 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■■■□ 21.4
MCF2L-210ENST00000409954 HAUS2Q9NVX0 235 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 SIRPGQ9P1W8 387 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 CAPN11Q9UMQ6 739 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 SSUH2Q9Y2M2 353 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 LUC7L2Q9Y383 392 aaKnown RBP14.55□□□□□ -0.08
MCF2L-210ENST00000409954 PPIL1Q9Y3C6 166 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 ITPR1Q14643 2758 aa14.55□□□□□ -0.08
MCF2L-210ENST00000409954 MYLKQ15746 1914 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 A8MX80 341 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 CDRT15L2A8MXV6 281 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 ZW10O43264 779 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 TNFSF15O95150 251 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 CYP1A2P05177 515 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 VIPR1P32241 457 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 PBX1P40424 430 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 CCL7P80098 99 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 SKOR1P84550 965 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 RHDQ02161 417 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 PEX6Q13608 980 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 NFKBIBQ15653 356 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 SMTNL2Q2TAL5 461 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 CCDC122Q5T0U0 273 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 ALKBH5Q6P6C2 394 aaKnown RBP14.54□□□□□ -0.08
MCF2L-210ENST00000409954 TP53INP2Q8IXH6 220 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 ATPAF2Q8N5M1 289 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 PDCD6IPQ8WUM4 868 aaKnown RBP14.54□□□□□ -0.08
MCF2L-210ENST00000409954 OR1E3Q8WZA6 343 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 CCDC74AQ96AQ1 378 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 TMEM159Q96B96 161 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 NSMCE3Q96MG7 304 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 MGME1Q9BQP7 344 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 TEX101Q9BY14 249 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 THAP2Q9H0W7 228 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 LRRN3Q9H3W5 708 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 DPEP2Q9H4A9 486 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 WDR26Q9H7D7 661 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 PCDH18Q9HCL0 1135 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 CYP4F12Q9HCS2 524 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 PHPT1Q9NRX4 125 aaPredicted RBP14.54□□□□□ -0.08
MCF2L-210ENST00000409954 ETNK2Q9NVF9 386 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 B4GALT6Q9UBX8 382 aa14.54□□□□□ -0.08
MCF2L-210ENST00000409954 A0A1W2PNU3 283 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-210ENST00000409954 GOLGA6L19H0YKK7 550 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 HEXIM1O94992 359 aaKnown RBP14.53□□□□□ -0.08
MCF2L-210ENST00000409954 CPP00450 1065 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 ITGA2BP08514 1039 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 MYCLP1P12525 358 aaPredicted RBP14.53□□□□□ -0.08
MCF2L-210ENST00000409954 GM2AP17900 193 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 IL4RP24394 825 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 TEAD1P28347 426 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 MMP13P45452 471 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 INHBCP55103 352 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 VAC14Q08AM6 782 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 ARHGEF7Q14155 803 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 KRT81Q14533 505 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 ARMC12Q5T9G4 340 aa14.53□□□□□ -0.08
MCF2L-210ENST00000409954 FOXR1Q6PIV2 292 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms