RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 HSCBQ8IWL3 235 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 ZADH2Q8N4Q0 377 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 KIAA1524Q8TCG1 905 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 GRIN3AQ8TCU5 1115 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 NOC3LQ8WTT2 800 aaKnown RBP7.04□□□□□ -1.28
UBE2F-204ENST00000409953 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
UBE2F-204ENST00000409953 RNF34Q969K3 372 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 CCDC47Q96A33 483 aaKnown RBP7.04□□□□□ -1.28
UBE2F-204ENST00000409953 MYEOVQ96EZ4 313 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 PDXPQ96GD0 296 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 ZNF559Q9BR84 538 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 ZDHHC6Q9H6R6 413 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 FAM49BQ9NUQ9 324 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 INTS13Q9NVM9 706 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 ZNF358Q9NW07 568 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 KLQ9UEF7 1012 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 LNPEPQ9UIQ6 1025 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 PADI1Q9ULC6 663 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 BTRCQ9Y297 605 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 HBS1LQ9Y450 684 aaKnown RBP7.04□□□□□ -1.28
UBE2F-204ENST00000409953 FADS3Q9Y5Q0 445 aa7.04□□□□□ -1.28
UBE2F-204ENST00000409953 NCOA6Q14686 2063 aaPredicted RBP7.04□□□□□ -1.28
UBE2F-204ENST00000409953 PABPN1LA6NDY0 278 aaKnown RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 MTA2O94776 668 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 REC8O95072 547 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 NDUFA10O95299 355 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ALPPP05187 535 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 TRIM49P0CI25 452 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 TRIM49CP0CI26 452 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ADRB3P13945 408 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 BMP6P22004 513 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 LPOP22079 712 aaPredicted RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 CHRNA3P32297 505 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 GNALP38405 381 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 SPAM1P38567 509 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 GPR3P46089 330 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 GTF2BQ00403 316 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 AMPD3Q01432 767 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 OTUD4Q01804 1114 aaKnown RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 NUCB1Q02818 461 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 SULT2A1Q06520 285 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 SQSTM1Q13501 440 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 RAPGEF1Q13905 1077 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 POSTNQ15063 836 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 KCTD16Q68DU8 428 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 PODNL1Q6PEZ8 512 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 FAM180AQ6UWF9 173 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 WDR49Q8IV35 697 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 LMNTD2Q8IXW0 634 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 MYCT1Q8N699 235 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ACRBPQ8NEB7 543 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 TMIEQ8NEW7 156 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ASB12Q8WXK4 309 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 TM9SF4Q92544 642 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 SCARF2Q96GP6 870 aaPredicted RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 PPP1R16AQ96I34 528 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 COX4I2Q96KJ9 171 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 FAM210AQ96ND0 272 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 PAIP2Q9BPZ3 127 aaKnown RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 BRD8Q9H0E9 1235 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 SMYD3Q9H7B4 428 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 BRMS1Q9HCU9 246 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 PNPLA8Q9NP80 782 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ATP13A2Q9NQ11 1180 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 LHX9Q9NQ69 397 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 MBNL1Q9NR56 388 aaKnown RBP7.03□□□□□ -1.28
UBE2F-204ENST00000409953 OLAHQ9NV23 265 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ARHGEF38Q9NXL2 777 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 PDP2Q9P2J9 529 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 SLC25A13Q9UJS0 675 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 RCAN3Q9UKA8 241 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 ACAD8Q9UKU7 415 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 PLEKHM1Q9Y4G2 1056 aa7.03□□□□□ -1.28
UBE2F-204ENST00000409953 CHD3Q12873 2000 aaKnown RBP7.02□□□□□ -1.29
UBE2F-204ENST00000409953 TMEM238LA0A1B0GVL6 79 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 GOLGA8IPA6NC78 632 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 GOLGA8JA6NMD2 632 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 CDK2AP1O14519 115 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 TOR1BO14657 336 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 PCDH17O14917 1159 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 ZWINTO95229 277 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 STAU1O95793 577 aaKnown RBP7.02□□□□□ -1.29
UBE2F-204ENST00000409953 TNFP01375 233 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 IFNA2P01563 188 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 PRNPP04156 253 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 HTR1BP28222 390 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 DDIT3P35638 169 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 TSFMP43897 325 aaKnown RBP7.02□□□□□ -1.29
UBE2F-204ENST00000409953 SLC11A2P49281 568 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 YWHAGP61981 247 aaKnown RBP eCLIP7.02□□□□□ -1.29
UBE2F-204ENST00000409953 PDLIM3Q53GG5 364 aaPredicted RBP7.02□□□□□ -1.29
UBE2F-204ENST00000409953 ARSHQ5FYA8 562 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 EFHC1Q5JVL4 640 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 ANKRD40Q6AI12 368 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 BHLHB9Q6PI77 547 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 GFRALQ6UXV0 394 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 MED25Q71SY5 747 aa7.02□□□□□ -1.29
UBE2F-204ENST00000409953 C17orf82Q86X59 251 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms