RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ACOX1Q15067 660 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 IRF4Q15306 451 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 CNGA3Q16281 694 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 Q6ZSR6 202 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 B4GALNT4Q76KP1 1039 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 DGLUCYQ7Z3D6 616 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 TP53I13Q8NBR0 393 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 OR2I1PQ8NGU4 316 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 PIH1D2Q8WWB5 315 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 MAIP1Q8WWC4 291 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 CENPTQ96BT3 561 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 LRRC45Q96CN5 670 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 MCCC1Q96RQ3 725 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 SRPK1Q96SB4 655 aaKnown RBP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 RBM15Q96T37 977 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 KLF6Q99612 283 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 HERPUD2Q9BSE4 406 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 KCNF1Q9H3M0 494 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 FAM153AQ9UHL3 310 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 RSPH14Q9UHP6 348 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 FNDC3AQ9Y2H6 1198 aaKnown RBP10.94□□□□□ -0.66
CHMP3-205ENST00000409810 COQ6Q9Y2Z9 468 aa10.94□□□□□ -0.66
CHMP3-205ENST00000409810 A0A1B0GTQ1 180 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 GOLGA6CA6NDK9 693 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 GOLGA6BA6NDN3 693 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 POM121BA6NF01 834 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 NPIPB15A6NHN6 443 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-205ENST00000409810 A8MX80 341 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 H0Y8X5 98 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 FLRT2O43155 660 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 KIF5CO60282 957 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 PCDHGA12O60330 932 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 RECQL5O94762 991 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-205ENST00000409810 PDHA1P08559 390 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 GOLGA6DP0CG33 693 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 CTPS1P17812 591 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 NFKB1P19838 968 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 CSRP1P21291 193 aaKnown RBP10.93□□□□□ -0.66
CHMP3-205ENST00000409810 RXRGP48443 463 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 YPEL5P62699 121 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 SEMG2Q02383 582 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 CDK18Q07002 472 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 MPP3Q13368 585 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 MTM1Q13496 603 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 PRPSAP1Q14558 356 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 PCSK7Q16549 785 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 DENND2CQ68D51 928 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 PARGQ86W56 976 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 SLC13A5Q86YT5 568 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-205ENST00000409810 RAVER1Q8IY67 606 aaKnown RBP10.93□□□□□ -0.66
CHMP3-205ENST00000409810 ZNF567Q8N184 647 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 OR13H1Q8NG92 308 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 ATL2Q8NHH9 583 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 NUS1Q96E22 293 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 BMFQ96LC9 184 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 FCRL5Q96RD9 977 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 LYSMD1Q96S90 227 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 MLPHQ9BV36 600 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-205ENST00000409810 GBA3Q9H227 469 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 GOLGA6AQ9NYA3 693 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 JRKLQ9Y4A0 524 aa10.93□□□□□ -0.66
CHMP3-205ENST00000409810 GOLGA4Q13439 2230 aaKnown RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 DCDC2BA2VCK2 349 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ANKRD66B4E2M5 251 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 H3BM21 787 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 PMPCBO75439 489 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ANXA9O76027 345 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 NDST3O95803 873 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 MT-CYBP00156 380 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 PCCBP05166 539 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 PYGLP06737 847 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ALPIP09923 528 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 HTR1BP28222 390 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 CD68P34810 354 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 HNF1BP35680 557 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 GEMP55040 296 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 PFN3P60673 137 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 PDE1CQ14123 709 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 GALNT3Q14435 633 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 QPCTQ16769 361 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 WSCD2Q2TBF2 565 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ANKRD20A2Q5SQ80 823 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ANKRD20A1Q5TYW2 823 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ANKRD20A3Q5VUR7 823 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 LRRC66Q68CR7 880 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ESRP1Q6NXG1 681 aaKnown RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 SPATS2Q86XZ4 545 aaKnown RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 NAXDQ8IW45 347 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 CCHCR1Q8TD31 782 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 TADA1Q96BN2 335 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 DTD2Q96FN9 168 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 COQ10AQ96MF6 247 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 SPATA13Q96N96 652 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 FAM118BQ9BPY3 351 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 FSD1LQ9BXM9 530 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 IL21RQ9HBE5 538 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 GPR27Q9NS67 375 aa10.92□□□□□ -0.66
CHMP3-205ENST00000409810 AAR2Q9Y312 384 aaKnown RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 ARID1BQ8NFD5 2236 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-205ENST00000409810 LRP4O75096 1905 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms