RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 GXYLT1Q4G148 440 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 C6orf10Q5SRN2 563 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 APOBEC3HQ6NTF7 200 aaKnown RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 TRAPPC11Q7Z392 1133 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 CERS3Q8IU89 383 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 MIGA1Q8NAN2 632 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 USP38Q8NB14 1042 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 AGBL3Q8NEM8 1001 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 B4GALNT2Q8NHY0 566 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 EME1Q96AY2 570 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 ZBED3Q96IU2 234 aaPredicted RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 CAMK1GQ96NX5 476 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 HDHD5Q9BXW7 423 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 SLCO5A1Q9H2Y9 848 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 UPF2Q9HAU5 1272 aaKnown RBP4.62□□□□□ -1.67
CLK1-203ENST00000409769 PLEKHA2Q9HB19 425 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 Q9N2J8 555 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 ARL15Q9NXU5 204 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 FEM1BQ9UK73 627 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 ICKQ9UPZ9 632 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 DERAQ9Y315 318 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 ZNF541Q9H0D2 1346 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 SCN4AP35499 1836 aa4.62□□□□□ -1.67
CLK1-203ENST00000409769 WDR90Q96KV7 1748 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 TRBV5-7A0A0A0MS05 114 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 CXorf65A6NEN9 183 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 MDM4O15151 490 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 PIP5K1CO60331 668 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 CCNT1O60563 726 aaKnown RBP4.61□□□□□ -1.67
CLK1-203ENST00000409769 METTL18O95568 372 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 BAG3O95817 575 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 KLKB1P03952 638 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 CNPP09543 421 aaKnown RBP4.61□□□□□ -1.67
CLK1-203ENST00000409769 ARSAP15289 507 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 RPS12P25398 132 aaKnown RBP4.61□□□□□ -1.67
CLK1-203ENST00000409769 AVPR2P30518 371 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 CIITAP33076 1130 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 SLC16A2P36021 539 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 MMP14P50281 582 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 MVDP53602 400 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 PPFIA1Q13136 1202 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 PDCLQ13371 301 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 TNIP1Q15025 636 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 CTXN3Q4LDR2 81 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 SBK1Q52WX2 424 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 STOX1Q6ZVD7 989 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 IGFN1Q86VF2 1251 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 RBMXL3Q8N7X1 1067 aaKnown RBP4.61□□□□□ -1.67
CLK1-203ENST00000409769 CSGALNACT1Q8TDX6 532 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 HDAC7Q8WUI4 952 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 SDR42E1Q8WUS8 393 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 GOLGA1Q92805 767 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 TEKT1Q969V4 418 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 PPP1R10Q96QC0 940 aaKnown RBP4.61□□□□□ -1.67
CLK1-203ENST00000409769 TRIM31Q9BZY9 425 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 ATP8A2Q9NTI2 1148 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 KLQ9UEF7 1012 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 PCDHGB3Q9Y5G1 929 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 PCDHAC2Q9Y5I4 1007 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 SLC4A4Q9Y6R1 1079 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 ROBO3Q96MS0 1386 aa4.61□□□□□ -1.67
CLK1-203ENST00000409769 COL2A1P02458 1487 aaPredicted RBP4.61□□□□□ -1.67
CLK1-203ENST00000409769 SRCAPQ6ZRS2 3230 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 WDHD1O75717 1129 aaPredicted RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 NDUFB8O95169 186 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CSF1P09603 554 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CYP4B1P13584 511 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 HSD3B1P14060 373 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 MCCP23508 829 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 GSTM2P28161 218 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 TYK2P29597 1187 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 POLD2P49005 469 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 RASSF2P50749 326 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 PAPOLAP51003 745 aaKnown RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 PMPCAQ10713 525 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 HYAL1Q12794 435 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 PKP1Q13835 747 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 C5orf22Q49AR2 442 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 INO80DQ53TQ3 878 aaPredicted RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 ALG10Q5BKT4 473 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 ALG10BQ5I7T1 473 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 ZNF484Q5JVG2 852 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CBWD5Q5RIA9 395 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CDC42EP5Q6NZY7 148 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 DENND1BQ6P3S1 775 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 CTR9Q6PD62 1173 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 AAGABQ6PD74 315 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 Q6ZTC4 211 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 TBC1D10CQ8IV04 446 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 DCP1BQ8IZD4 617 aaKnown RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 FAM185AQ8N0U4 392 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 GPC2Q8N158 579 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 SLC25A41Q8N5S1 370 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 C2CD4CQ8TF44 421 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 AFG1LQ8WV93 481 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 SNX21Q969T3 373 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 PRMT6Q96LA8 375 aaPredicted RBP4.6□□□□□ -1.67
CLK1-203ENST00000409769 HERC2P3Q9BVR0 1158 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 IDI2Q9BXS1 227 aa4.6□□□□□ -1.67
CLK1-203ENST00000409769 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms