RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 KHDC1Q4VXA5 237 aaKnown RBP20.17■□□□□ 0.82
USP39-204ENST00000409766 FSCBQ5H9T9 825 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 PHTF2Q8N3S3 785 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 STON2Q8WXE9 905 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 RMDN1Q96DB5 314 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 IL21Q9HBE4 155 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 MRPL17Q9NRX2 175 aaKnown RBP20.17■□□□□ 0.82
USP39-204ENST00000409766 CATSPERZQ9NTU4 200 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 VTI1BQ9UEU0 232 aa20.17■□□□□ 0.82
USP39-204ENST00000409766 ZMPSTE24O75844 475 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 TM7SF2O76062 418 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 SNUPNO95149 360 aaKnown RBP20.16■□□□□ 0.82
USP39-204ENST00000409766 OLFM2O95897 454 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 PDHA1P08559 390 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 TPBGLP0DKB5 382 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 OGNP20774 298 aaKnown RBP20.16■□□□□ 0.82
USP39-204ENST00000409766 KCNA5P22460 613 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 FDXRP22570 491 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 PSMA3P25788 255 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 SERPINB5P36952 375 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 TIAL1Q01085 375 aaKnown RBP eCLIP20.16■□□□□ 0.82
USP39-204ENST00000409766 KPNB1Q14974 876 aaKnown RBP20.16■□□□□ 0.82
USP39-204ENST00000409766 PIM3Q86V86 326 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 POU5F2Q8N7G0 328 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 WDR60Q8WVS4 1066 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 CCDC126Q96EE4 140 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 SHCBP1LQ9BZQ2 653 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 WDR55Q9H6Y2 383 aaPredicted RBP20.16■□□□□ 0.82
USP39-204ENST00000409766 TRPC7Q9HCX4 862 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 MAFFQ9ULX9 164 aa20.16■□□□□ 0.82
USP39-204ENST00000409766 GFRA2O00451 464 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 SCAMP3O14828 347 aaKnown RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 TEX28O15482 410 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 DCXO43602 365 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 SNAP91O60641 907 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 TBL1XO60907 577 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 CSF2RAP15509 400 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 HOXB8P17481 243 aaPredicted RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 STC1P52823 247 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 COPAP53621 1224 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 TAF1AQ15573 450 aaPredicted RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 TYSND1Q2T9J0 566 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 ACCSLQ4AC99 568 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 GPR158Q5T848 1215 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 LINGO4Q6UY18 593 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 ARL14EPQ8N8R7 260 aaPredicted RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 KDM1BQ8NB78 822 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 MDGA1Q8NFP4 955 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 CMTM5Q96DZ9 223 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 CNDP1Q96KN2 507 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 DCLRE1BQ9H816 532 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 MTF2Q9Y483 593 aaPredicted RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 PCDHGC4Q9Y5F7 938 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 RAI2Q9Y5P3 530 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 KIAA1671Q9BY89 1806 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 A8MT66 165 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 H0Y626 953 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 LILRB3O75022 631 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 IPO13O94829 963 aaKnown RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 TMCC1O94876 653 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 LMNAP02545 664 aaKnown RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 MZF1P28698 734 aaPredicted RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 MXRA7P84157 204 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 ACSBG2Q5FVE4 666 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 TXNDC8Q6A555 127 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 Q6ZNB5 142 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 SDCCAG8Q86SQ7 713 aaPredicted RBP20.15■□□□□ 0.82
USP39-204ENST00000409766 FEM1AQ9BSK4 669 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 NUF2Q9BZD4 464 aa20.15■□□□□ 0.82
USP39-204ENST00000409766 GOLGA8QA0A0J9YX86 632 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 CARNS1A5YM72 827 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 GOLGA8OA6NCC3 632 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 GOLGA8NF8WBI6 632 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 GNAZP19086 355 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 EPHA3P29320 983 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 SUOXP51687 545 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 NAA25Q14CX7 972 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 LSM12Q3MHD2 195 aaKnown RBP20.14■□□□□ 0.81
USP39-204ENST00000409766 PABPC1LQ4VXU2 614 aaKnown RBP20.14■□□□□ 0.81
USP39-204ENST00000409766 GLT6D1Q7Z4J2 308 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 ISCA2Q86U28 154 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 ITIH5Q86UX2 942 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 SCUBE1Q8IWY4 988 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 CARNMT1Q8N4J0 409 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 OR4K2Q8NGD2 314 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 FAM161BQ96MY7 647 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 THTPAQ9BU02 230 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 OSBPL1AQ9BXW6 950 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 OR51B4Q9Y5P0 310 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 MEI4A8MW99 385 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 JUNP05412 331 aaKnown RBP20.14■□□□□ 0.81
USP39-204ENST00000409766 SPATA31D3P0C874 917 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 HDCP19113 662 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 PRDX6P30041 224 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 KLF10Q13118 480 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 INO80DQ53TQ3 878 aaPredicted RBP20.14■□□□□ 0.81
USP39-204ENST00000409766 SPATA31D4Q6ZUB0 917 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 ULK2Q8IYT8 1036 aa20.14■□□□□ 0.81
USP39-204ENST00000409766 HJURPQ8NCD3 748 aaPredicted RBP20.14■□□□□ 0.81
USP39-204ENST00000409766 LPCAT1Q8NF37 534 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms