RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 FOXN3O00409 490 aaPredicted RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 TNFRSF10CO14798 259 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 NOBOXO60393 691 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 TPM2P07951 284 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 GP1BBP13224 206 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 KRT10P13645 584 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 CYP11B1P15538 503 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 ITIH1P19827 911 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 PON1P27169 355 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 EPHB2P29323 1055 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 SERPINA4P29622 427 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 GKP32189 559 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 CDH5P33151 784 aaPredicted RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 FLT3P36888 993 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 STAT1P42224 750 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 COPB1P53618 953 aaKnown RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 KIAA1024LP59773 190 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 ZFP36L1Q07352 338 aaKnown RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 KCNAB2Q13303 367 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 SERINC3Q13530 473 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 UBAP2LQ14157 1087 aaKnown RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 BECN1Q14457 450 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 NCAPHQ15003 741 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 TCEA2Q15560 299 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 MAN2A1Q16706 1144 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 UGP2Q16851 508 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 WSCD2Q2TBF2 565 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 AMZ1Q400G9 498 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 PARP15Q460N3 678 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 ATXN7L2Q5T6C5 722 aaPredicted RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 STRADAQ7RTN6 431 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 SPRED1Q7Z699 444 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 VASH2Q86V25 355 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 ZFAND4Q86XD8 727 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 ZNF677Q86XU0 584 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 XYLT1Q86Y38 959 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 FAM71AQ8IYT1 594 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 AGBL5Q8NDL9 886 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 GPR156Q8NFN8 814 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 TAAR9Q96RI9 348 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 TUBGCP5Q96RT8 1024 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 SUV39H2Q9H5I1 410 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 STN1Q9H668 368 aaKnown RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 ATP13A3Q9H7F0 1226 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 PLCB1Q9NQ66 1216 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 ANKMY1Q9P2S6 941 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 UBA2Q9UBT2 640 aaPredicted RBP7.79□□□□□ -1.16
LSM5-202ENST00000409292 ATP8A1Q9Y2Q0 1164 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 OR1A2Q9Y585 309 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 KIF26BQ2KJY2 2108 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 UNC13CQ8NB66 2214 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 KALRNO60229 2985 aa7.79□□□□□ -1.16
LSM5-202ENST00000409292 CFAP46Q8IYW2 2715 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 A0A1W2PQ67 120 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 PMS2P1A4D2B8 440 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 RNF103O00237 685 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 AGRPO00253 132 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 FGF10O15520 208 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 LRIG2O94898 1065 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 PLEKP08567 350 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 HOXC4P09017 264 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 ELFN1P0C7U0 828 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 ITGB6P18564 788 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 TFE3P19532 575 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 ERCC5P28715 1186 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 ALDH4A1P30038 563 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 GPR3P46089 330 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 LIG3P49916 1009 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 POLE2P56282 527 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 NFKB2Q00653 900 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 SRSF1Q07955 248 aaKnown RBP eCLIP7.78□□□□□ -1.16
LSM5-202ENST00000409292 LRRC73Q5JTD7 316 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 DCAF12Q5T6F0 453 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 OTUD1Q5VV17 481 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 TAF3Q5VWG9 929 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 SPECC1LQ69YQ0 1117 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 OGFOD3Q6PK18 319 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 TRIM72Q6ZMU5 477 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 LEKR1Q6ZMV7 388 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 SLFN11Q7Z7L1 901 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 DTX1Q86Y01 620 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 NRSN1Q8IZ57 195 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 CACNA2D3Q8IZS8 1091 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 C9orf43Q8TAL5 461 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 RXFP2Q8WXD0 754 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 AHCYL2Q96HN2 611 aaKnown RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 TEFMQ96QE5 360 aaKnown RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 SELENOOQ9BVL4 669 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 CDH19Q9H159 772 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 WDR26Q9H7D7 661 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 CYP4F12Q9HCS2 524 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 PCDH12Q9NPG4 1184 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 ANLNQ9NQW6 1124 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 METTL5Q9NRN9 209 aaKnown RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 PHPT1Q9NRX4 125 aaPredicted RBP7.78□□□□□ -1.16
LSM5-202ENST00000409292 PCDHGA3Q9Y5H0 932 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 PIEZO2Q9H5I5 2752 aa7.78□□□□□ -1.16
LSM5-202ENST00000409292 DAPK3O43293 454 aa7.77□□□□□ -1.17
LSM5-202ENST00000409292 CELA2BP08218 269 aaPredicted RBP7.77□□□□□ -1.17
LSM5-202ENST00000409292 KRT3P12035 628 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms