RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 MLLT10P55197 1068 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 PAK1Q13153 545 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 TRA2AQ13595 282 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 NR1D2Q14995 579 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 CLPPQ16740 277 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 C15orf59Q2T9L4 293 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 DCAF12Q5T6F0 453 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 TAF3Q5VWG9 929 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 UNC5BQ8IZJ1 945 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 KIAA1143Q96AT1 154 aaPredicted RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 LGR4Q9BXB1 951 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 ASPSCR1Q9BZE9 553 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 METTL5Q9NRN9 209 aaKnown RBP16.74■□□□□ 0.27
CHMP3-203ENST00000409225 ATP8A1Q9Y2Q0 1164 aa16.74■□□□□ 0.27
CHMP3-203ENST00000409225 LOC101059948A0A1B0GTJ6 334 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 PRSS38A1L453 326 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 BIN1O00499 593 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 TEX33O43247 280 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 ECEL1O95672 775 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 PLEKP08567 350 aaPredicted RBP16.73■□□□□ 0.27
CHMP3-203ENST00000409225 CCNB1P14635 433 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 NR1D1P20393 614 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 CD97P48960 835 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 KLRB1Q12918 225 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 CYTH1Q15438 398 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 INO80DQ53TQ3 878 aaPredicted RBP16.73■□□□□ 0.27
CHMP3-203ENST00000409225 ATP1A1-AS1Q5TC04 95 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 ANKS6Q68DC2 871 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 PHLDB2Q86SQ0 1253 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 C17orf82Q86X59 251 aaPredicted RBP16.73■□□□□ 0.27
CHMP3-203ENST00000409225 ZSWIM9Q86XI8 627 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 DNAAF5Q86Y56 855 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 NRROSQ86YC3 692 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 OR4D9Q8NGE8 314 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 HCAR2Q8TDS4 363 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 PATE1Q8WXA2 126 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 ZMYND15Q9H091 742 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 NOL6Q9H6R4 1146 aaKnown RBP16.73■□□□□ 0.27
CHMP3-203ENST00000409225 WDR26Q9H7D7 661 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 CARS2Q9HA77 564 aaKnown RBP16.73■□□□□ 0.27
CHMP3-203ENST00000409225 TMEM9Q9P0T7 183 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 TAAR2Q9P1P5 351 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 PILRAQ9UKJ1 303 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 TP53TG5Q9Y2B4 290 aa16.73■□□□□ 0.27
CHMP3-203ENST00000409225 BUB1BO60566 1050 aaPredicted RBP16.72■□□□□ 0.27
CHMP3-203ENST00000409225 KRT7P08729 469 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 HOXC4P09017 264 aaPredicted RBP16.72■□□□□ 0.27
CHMP3-203ENST00000409225 THRAP10827 490 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 CSF2RBP32927 897 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 STAT1P42224 750 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 SEPT6Q14141 434 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 TSR1Q2NL82 804 aaKnown RBP16.72■□□□□ 0.27
CHMP3-203ENST00000409225 C16orf46Q6P387 395 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 BRAT1Q6PJG6 821 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 CAMK1DQ8IU85 385 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 NLGN4XQ8N0W4 816 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 PELI3Q8N2H9 469 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 CCDC185Q8N715 623 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 NLGN4YQ8NFZ3 816 aaPredicted RBP16.72■□□□□ 0.27
CHMP3-203ENST00000409225 TIGD1Q96MW7 591 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 GSDMCQ9BYG8 508 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 SIX2Q9NPC8 291 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 KCNK4Q9NYG8 393 aa16.72■□□□□ 0.27
CHMP3-203ENST00000409225 ENO4A6NNW6 628 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 B4E171 279 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 AGFG2O95081 481 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 FGFR1OPO95684 399 aaKnown RBP16.71■□□□□ 0.27
CHMP3-203ENST00000409225 ELFN1P0C7U0 828 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 AK4P27144 223 aaPredicted RBP16.71■□□□□ 0.27
CHMP3-203ENST00000409225 MAP4P27816 1152 aaKnown RBP16.71■□□□□ 0.27
CHMP3-203ENST00000409225 TRIM23P36406 574 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 TSPAN7P41732 249 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 GPR3P46089 330 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 UQCRFS1P47985 274 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 PPM1FP49593 454 aaPredicted RBP16.71■□□□□ 0.27
CHMP3-203ENST00000409225 RAB15P59190 212 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 BPIFB4P59827 614 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 ILF3Q12906 894 aaKnown RBP eCLIP16.71■□□□□ 0.275e-7■■■■□ 23.6
CHMP3-203ENST00000409225 RALGDSQ12967 914 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 GRM3Q14832 879 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 SLC30A9Q6PML9 568 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 FAM71AQ8IYT1 594 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 MSANTD4Q8NCY6 345 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 CPA5Q8WXQ8 436 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 ZNF641Q96N77 438 aaPredicted RBP16.71■□□□□ 0.27
CHMP3-203ENST00000409225 CTRCQ99895 268 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 EFHD1Q9BUP0 239 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 CREBBPQ92793 2442 aa16.71■□□□□ 0.27
CHMP3-203ENST00000409225 IGHV1OR21-1A0A087WYE8 117 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 RASA4BC9J798 803 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 PPM1DO15297 605 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 RASA4O43374 803 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 CYP11B1P15538 503 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 GNPDA1P46926 289 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 CCDC14Q49A88 953 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 PNCKQ6P2M8 343 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 LIPIQ6XZB0 460 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 ARCQ7LC44 396 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 KDELC2Q7Z4H8 507 aa16.7■□□□□ 0.26
CHMP3-203ENST00000409225 PAF1Q8N7H5 531 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms